RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 WNT8AQ9H1J5 351 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 DIS3Q9Y2L1 958 aaKnown RBP9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 SLC4A7Q9Y6M7 1214 aa9.44□□□□□ -0.9
SMARCE1-217ENST00000580654 BRWD1Q9NSI6 2320 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 CTAGE5O15320 804 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 DUSP11O75319 330 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 CCL23P55773 120 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 TAP1Q03518 808 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 GRB10Q13322 594 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 SEPT2Q15019 361 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 CERKLQ49MI3 558 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 GJD3Q8N144 294 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 SLC43A3Q8NBI5 491 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 MMP19Q99542 508 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 NOL10Q9BSC4 688 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 TANGO6Q9C0B7 1094 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 EHD4Q9H223 541 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 HIPK3Q9H422 1215 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 LRP2BPQ9P2M1 347 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 SERPINB13Q9UIV8 391 aa9.43□□□□□ -0.9
SMARCE1-217ENST00000580654 PTPRCP08575 1304 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 TLR3O15455 904 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 C6orf222P0C671 652 aaPredicted RBP9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 ATP2A2P16615 1042 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 TMEM67Q5HYA8 995 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 ATF7IPQ6VMQ6 1270 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 ARNTL2Q8WYA1 636 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 NEUROD6Q96NK8 337 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 NOC4LQ9BVI4 516 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 FAM184BQ9ULE4 1060 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 ADAMTS5Q9UNA0 930 aa9.42□□□□□ -0.9
SMARCE1-217ENST00000580654 NAV1Q8NEY1 1877 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 GRIN2DO15399 1336 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 SLC25A27O95847 323 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 IL9P15248 144 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 GJA9P57773 515 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 RIOX2Q8IUF8 465 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 SIAH1Q8IUQ4 282 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 PCSK9Q8NBP7 692 aaKnown RBP9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 VTI1AQ96AJ9 217 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 SCLYQ96I15 445 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 AGBL1Q96MI9 1066 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 SNRKQ9NRH2 765 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 ZHX1Q9UKY1 873 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 AKAP2Q9Y2D5 859 aa9.41□□□□□ -0.9
SMARCE1-217ENST00000580654 FLOT1O75955 427 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 CYP2E1P05181 493 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 UBTFL1P0CB47 393 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 ALADP13716 330 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 PLCD1P51178 756 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 NKX3-2P78367 333 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 LEXMQ3ZCV2 418 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 MAMDC4Q6UXC1 1216 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 REPS2Q8NFH8 660 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 TRPV6Q9H1D0 765 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 CABP5Q9NP86 173 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 MYH8P13535 1937 aa9.4□□□□□ -0.9
SMARCE1-217ENST00000580654 ASTN1O14525 1302 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 TRIOO75962 3097 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 TANC1Q9C0D5 1861 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 DNAJC25-GNG10A0A024R161 153 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 B4GALT4O60513 344 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 PSEN2P49810 448 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 BEX3Q00994 111 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 GABPAQ06546 454 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 KCTD2Q14681 263 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 CCDC144BQ3MJ40 725 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 GNASQ5JWF2 1037 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 HFE2Q6ZVN8 426 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 RPUSD2Q8IZ73 545 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 SPICE1Q8N0Z3 855 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 MSL3Q8N5Y2 521 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 PRSS33Q8NF86 280 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 SSH1Q8WYL5 1049 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 FGD4Q96M96 766 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 KATNBL1Q9H079 304 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 UBE2ZQ9H832 354 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 PIH1D3Q9NQM4 214 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 FBXO28Q9NVF7 368 aa9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 ZNF214Q9UL59 606 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-217ENST00000580654 SIP14410 1827 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 DCXO43602 365 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 UQCRFS1P1P0C7P4 283 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 PTGS1P23219 599 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 USP5P45974 858 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 ITGA7Q13683 1181 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 ACVR2BQ13705 512 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 GORABQ5T7V8 394 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms