RNA–Protein interactions for RNA: ENST00000580506.2

RN7SL543P-201, Transcript of RNA, 7SL, cytoplasmic 543, pseudogene, humanhuman

BASIC

Gene RN7SL543P, Length 299 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL543P-201ENST00000580506 UBA5Q9GZZ9 404 aa12.68□□□□□ -0.38
RN7SL543P-201ENST00000580506 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
RN7SL543P-201ENST00000580506 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.68□□□□□ -0.38
RN7SL543P-201ENST00000580506 COL11A1P12107 1806 aaPredicted RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 TNRC18O15417 2968 aaPredicted RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 CCND3P30281 292 aaPredicted RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 CYP2C19P33261 490 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 MLLT1Q03111 559 aaPredicted RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 GPATCH4Q5T3I0 446 aaKnown RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 OLFML2BQ68BL8 750 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 CASC1Q6TDU7 716 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 STAG2Q8N3U4 1231 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 CHST13Q8NET6 341 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 U2AF1L4Q8WU68 220 aaKnown RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 MAML3Q96JK9 1138 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 FGD4Q96M96 766 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 DEFB118Q96PH6 123 aa12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 CTDP1Q9Y5B0 961 aaPredicted RBP12.67□□□□□ -0.38
RN7SL543P-201ENST00000580506 BRCA2P51587 3418 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 PRC1O43663 620 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 ICAM1P05362 532 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 EXOSC10Q01780 885 aaKnown RBP12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 TROAPQ12815 778 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 KCTD2Q14681 263 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 ADCK5Q3MIX3 580 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 TMEM67Q5HYA8 995 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 LHX8Q68G74 356 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 TRERF1Q96PN7 1200 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 LY9Q9HBG7 655 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 HMX1Q9NP08 348 aaPredicted RBP12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 MAD2L2Q9UI95 211 aa12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
RN7SL543P-201ENST00000580506 PARP1P09874 1014 aaKnown RBP12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 ALAS1P13196 640 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 WTAPQ15007 396 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 TKFCQ3LXA3 575 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 ASPRV1Q53RT3 343 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 ADGRF4Q8IZF3 695 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 CLEC4DQ8WXI8 215 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 MTA3Q9BTC8 594 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 JMJD4Q9H9V9 463 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
RN7SL543P-201ENST00000580506 ZNF236Q9UL36 1845 aa12.65□□□□□ -0.39
RN7SL543P-201ENST00000580506 SH2B2O14492 632 aaPredicted RBP12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 CYBAP13498 195 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 MCM5P33992 734 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 HSPA4P34932 840 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 GRM4Q14833 912 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 FAM133AQ8N9E0 248 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 MTMR8Q96EF0 704 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 DDX11Q96FC9 970 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 PURBQ96QR8 312 aaKnown RBP12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 TINF2Q9BSI4 451 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 LRRC2Q9BYS8 371 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 ACAD9Q9H845 621 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 A1CFQ9NQ94 594 aaKnown RBP12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 SLC5A4Q9NY91 659 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 FBXO40Q9UH90 709 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 CCPG1Q9ULG6 757 aa12.64□□□□□ -0.39
RN7SL543P-201ENST00000580506 ASTN1O14525 1302 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 SOWAHBA6NEL2 793 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 NFIBO00712 420 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 SNAI1O95863 264 aaPredicted RBP12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 MAMDC4Q6UXC1 1216 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 ANKRD35Q8N283 1001 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 TMEM87BQ96K49 555 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 NEK1Q96PY6 1258 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 VAT1LQ9HCJ6 419 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 OGDHLQ9ULD0 1010 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 MKI67P46013 3256 aaKnown RBP12.63□□□□□ -0.39
RN7SL543P-201ENST00000580506 ERICH2A1L162 156 aa12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 CYTH3O43739 400 aa12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 PPP1R11O60927 126 aaPredicted RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 CPA1P15085 419 aa12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 LIFRP42702 1097 aa12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 BAATQ14032 418 aaPredicted RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 QRICH1Q2TAL8 776 aa12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 DHX32Q7L7V1 743 aaKnown RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
RN7SL543P-201ENST00000580506 ZNF654Q8IZM8 581 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms