RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ZNF543Q08ER8 600 aa20.47■□□□□ 0.87
ITGB4-205ENST00000579211 GPATCH4Q5T3I0 446 aaKnown RBP20.47■□□□□ 0.87
ITGB4-205ENST00000579211 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
ITGB4-205ENST00000579211 AGBL1Q96MI9 1066 aa20.47■□□□□ 0.87
ITGB4-205ENST00000579211 PAK6Q9NQU5 681 aaPredicted RBP20.47■□□□□ 0.87
ITGB4-205ENST00000579211 FLRT1Q9NZU1 646 aa20.47■□□□□ 0.87
ITGB4-205ENST00000579211 DHX16O60231 1041 aaKnown RBP20.46■□□□□ 0.87
ITGB4-205ENST00000579211 PARP1P09874 1014 aaKnown RBP20.46■□□□□ 0.87
ITGB4-205ENST00000579211 GOLGA8HP0CJ92 632 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 CYP2C19P33261 490 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 WTAPQ15007 396 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 TKFCQ3LXA3 575 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 OLFML2BQ68BL8 750 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 BTNL9Q6UXG8 535 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 CHST3Q7LGC8 479 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 TRERF1Q96PN7 1200 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 ACAD9Q9H845 621 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 CCPG1Q9ULG6 757 aa20.46■□□□□ 0.87
ITGB4-205ENST00000579211 SLC27A2O14975 620 aa20.45■□□□□ 0.86
ITGB4-205ENST00000579211 MAP3K21Q5TCX8 1036 aa20.45■□□□□ 0.86
ITGB4-205ENST00000579211 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
ITGB4-205ENST00000579211 MAML3Q96JK9 1138 aa20.45■□□□□ 0.86
ITGB4-205ENST00000579211 RNF146Q9NTX7 359 aa20.45■□□□□ 0.86
ITGB4-205ENST00000579211 BAZ2BQ9UIF8 2168 aaKnown RBP20.44■□□□□ 0.86
ITGB4-205ENST00000579211 SNHG28P0DPA3 235 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 CCND3P30281 292 aaPredicted RBP20.44■□□□□ 0.86
ITGB4-205ENST00000579211 ASPRV1Q53RT3 343 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 TMEM67Q5HYA8 995 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 UBA5Q9GZZ9 404 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 RANBP17Q9H2T7 1088 aaKnown RBP20.44■□□□□ 0.86
ITGB4-205ENST00000579211 PNMA2Q9UL42 364 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 DIS3Q9Y2L1 958 aaKnown RBP20.44■□□□□ 0.86
ITGB4-205ENST00000579211 TAF6LQ9Y6J9 622 aa20.44■□□□□ 0.86
ITGB4-205ENST00000579211 ICAM1P05362 532 aa20.43■□□□□ 0.86
ITGB4-205ENST00000579211 MCM5P33992 734 aa20.43■□□□□ 0.86
ITGB4-205ENST00000579211 NECTIN1Q15223 517 aa20.43■□□□□ 0.86
ITGB4-205ENST00000579211 STOX1Q6ZVD7 989 aa20.43■□□□□ 0.86
ITGB4-205ENST00000579211 ZNF536O15090 1300 aa20.43■□□□□ 0.86
ITGB4-205ENST00000579211 FARP2O94887 1054 aaPredicted RBP20.42■□□□□ 0.86
ITGB4-205ENST00000579211 SEC23AQ15436 765 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 ZNF792Q3KQV3 632 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 CATIPQ7Z7H3 387 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 SHISA4Q96DD7 197 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 TINF2Q9BSI4 451 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 VAT1LQ9HCJ6 419 aa20.42■□□□□ 0.86
ITGB4-205ENST00000579211 BRCA2P51587 3418 aa20.41■□□□□ 0.86
ITGB4-205ENST00000579211 PRC1O43663 620 aa20.41■□□□□ 0.86
ITGB4-205ENST00000579211 NFXL1Q6ZNB6 911 aa20.41■□□□□ 0.86
ITGB4-205ENST00000579211 MB21D2Q8IYB1 491 aaPredicted RBP20.41■□□□□ 0.86
ITGB4-205ENST00000579211 POTEB2H3BUK9 544 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 PFASO15067 1338 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 MSCO60682 206 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 PRAMEF19Q5SWL8 479 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 NSMFQ6X4W1 530 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 CRISPLD2Q9H0B8 497 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 CPVLQ9H3G5 476 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 CNPY2Q9Y2B0 182 aa20.4■□□□□ 0.86
ITGB4-205ENST00000579211 REC8O95072 547 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 USH1GQ495M9 461 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 ADGRF4Q8IZF3 695 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 ANKLE1Q8NAG6 615 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 NUP133Q8WUM0 1156 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 DPF3Q92784 378 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 HTATIP2Q9BUP3 242 aa20.39■□□□□ 0.85
ITGB4-205ENST00000579211 DDX20Q9UHI6 824 aaKnown RBP20.39■□□□□ 0.85
ITGB4-205ENST00000579211 PTPDC1A2A3K4 754 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 KLRF2D3W0D1 207 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 CYBAP13498 195 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 KRT32Q14532 448 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 CDC37Q16543 378 aaPredicted RBP20.38■□□□□ 0.85
ITGB4-205ENST00000579211 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.38■□□□□ 0.85
ITGB4-205ENST00000579211 NECAB2Q7Z6G3 386 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 TMTC2Q8N394 836 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 MSL3Q8N5Y2 521 aaKnown RBP20.38■□□□□ 0.85
ITGB4-205ENST00000579211 TMEM87BQ96K49 555 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 NEK1Q96PY6 1258 aa20.38■□□□□ 0.85
ITGB4-205ENST00000579211 A1CFQ9NQ94 594 aaKnown RBP20.38■□□□□ 0.85
ITGB4-205ENST00000579211 LCTP09848 1927 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 DNAJC25-GNG10A0A024R161 153 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 MYCNP04198 464 aaPredicted RBP20.37■□□□□ 0.85
ITGB4-205ENST00000579211 ANTXR2P58335 489 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 STAG2Q8N3U4 1231 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 TRPV1Q8NER1 839 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 IGDCC4Q8TDY8 1250 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 PAWRQ96IZ0 340 aaKnown RBP20.37■□□□□ 0.85
ITGB4-205ENST00000579211 MTA3Q9BTC8 594 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 OGDHLQ9ULD0 1010 aa20.37■□□□□ 0.85
ITGB4-205ENST00000579211 WDR19Q8NEZ3 1342 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 SEPT4O43236 478 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 TAL1P17542 331 aaPredicted RBP20.36■□□□□ 0.85
ITGB4-205ENST00000579211 CNTN2Q02246 1040 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 GRM4Q14833 912 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 ANO1Q5XXA6 986 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 ZNF467Q7Z7K2 595 aaPredicted RBP20.36■□□□□ 0.85
ITGB4-205ENST00000579211 CTCFLQ8NI51 663 aaPredicted RBP20.36■□□□□ 0.85
ITGB4-205ENST00000579211 SENP2Q9HC62 589 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 NRBP1Q9UHY1 535 aa20.36■□□□□ 0.85
ITGB4-205ENST00000579211 MAD2L2Q9UI95 211 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms