RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 ADGRF4Q8IZF3 695 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 ABRAQ8N0Z2 381 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 FBXL16Q8N461 479 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 FANCBQ8NB91 859 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 RANBP17Q9H2T7 1088 aaKnown RBP13.42□□□□□ -0.26
ERBB2-208ENST00000578630 MAD2L2Q9UI95 211 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
ERBB2-208ENST00000578630 GABRQQ9UN88 632 aa13.42□□□□□ -0.26
ERBB2-208ENST00000578630 ZBTB43O43298 467 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 ICAM1P05362 532 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 XRCC5P13010 732 aaKnown RBP13.41□□□□□ -0.26
ERBB2-208ENST00000578630 CPA1P15085 419 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 CYP2B6P20813 491 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 RGS2P41220 211 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 SNAP25P60880 206 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 KCTD2Q14681 263 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 PPP2R5BQ15173 497 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 TRMT44Q8IYL2 757 aaKnown RBP13.41□□□□□ -0.26
ERBB2-208ENST00000578630 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 AGBL1Q96MI9 1066 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 MMP19Q99542 508 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 PDRG1Q9NUG6 133 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 CCPG1Q9ULG6 757 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 RIPK3Q9Y572 518 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 PTCH2Q9Y6C5 1203 aa13.41□□□□□ -0.26
ERBB2-208ENST00000578630 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 CCDC196A0A1B0GTZ2 297 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 ADCY3O60266 1144 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 ALAS1P13196 640 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 GRK4P32298 578 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 RCAN1P53805 252 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 MAP2K5Q13163 448 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-208ENST00000578630 SLC9C1Q4G0N8 1177 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 MORN1Q5T089 497 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 ANKRD35Q8N283 1001 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 SLAIN1Q8ND83 568 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 PXYLP1Q8TE99 480 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 BRF1Q92994 677 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 MYL10Q9BUA6 226 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 JMJD4Q9H9V9 463 aa13.4□□□□□ -0.26
ERBB2-208ENST00000578630 RBM28Q9NW13 759 aaKnown RBP13.4□□□□□ -0.26
ERBB2-208ENST00000578630 BIN2Q9UBW5 565 aaPredicted RBP13.4□□□□□ -0.26
ERBB2-208ENST00000578630 ZNF536O15090 1300 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 ADORA2AP29274 412 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 UBXN2AP68543 259 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 GRB14Q14449 540 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 CDC37Q16543 378 aaPredicted RBP13.39□□□□□ -0.27
ERBB2-208ENST00000578630 APOA5Q6Q788 366 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 MICU3Q86XE3 530 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 FBXO11Q86XK2 927 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 AGXT2Q9BYV1 514 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 C22orf23Q9BZE7 217 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 UPF3BQ9BZI7 483 aaKnown RBP13.39□□□□□ -0.27
ERBB2-208ENST00000578630 CPVLQ9H3G5 476 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
ERBB2-208ENST00000578630 ZBTB5O15062 677 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 HOXC6P09630 235 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 RXRAP19793 462 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 ANKRD1Q15327 319 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 RTN1Q16799 776 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 USP6NLQ92738 828 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 RRP36Q96EU6 259 aaKnown RBP13.38□□□□□ -0.27
ERBB2-208ENST00000578630 IL17RAQ96F46 866 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 AMNQ9BXJ7 453 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
ERBB2-208ENST00000578630 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 BRPF3Q9ULD4 1205 aa13.38□□□□□ -0.27
ERBB2-208ENST00000578630 DIS3Q9Y2L1 958 aaKnown RBP13.38□□□□□ -0.27
ERBB2-208ENST00000578630 MRPL11Q9Y3B7 192 aaKnown RBP13.38□□□□□ -0.27
ERBB2-208ENST00000578630 RLFQ13129 1914 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 GOLGA8BA8MQT2 603 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 METAP2P50579 478 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERBB2-208ENST00000578630 NEK4P51957 841 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 EVCP57679 992 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.37□□□□□ -0.27
ERBB2-208ENST00000578630 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 MCF2L2Q86YR7 1114 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 RAB11FIP4Q86YS3 637 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 MTMR8Q96EF0 704 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 ZNF274Q96GC6 653 aaPredicted RBP13.37□□□□□ -0.27
ERBB2-208ENST00000578630 ABHD8Q96I13 439 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 APBA2Q99767 749 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 MAF1Q9H063 256 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
ERBB2-208ENST00000578630 DOCK3Q8IZD9 2030 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 ABCB11O95342 1321 aa13.37□□□□□ -0.27
ERBB2-208ENST00000578630 COBLO75128 1261 aa13.36□□□□□ -0.27
ERBB2-208ENST00000578630 USH1GQ495M9 461 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms