RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SERTAD1Q9UHV2 236 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
SKA2-204ENST00000578519 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
SKA2-204ENST00000578519 M0R2N6 131 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 NEMFO60524 1076 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 GCFC2P16383 781 aaKnown RBP12.62□□□□□ -0.39
SKA2-204ENST00000578519 HOXA7P31268 230 aaPredicted RBP12.62□□□□□ -0.39
SKA2-204ENST00000578519 UBA7P41226 1012 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 ZNF75DP51815 510 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 TMEM266Q2M3C6 531 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 ADGRF4Q8IZF3 695 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 RASSF8Q8NHQ8 419 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 MRFAP1L1Q96HT8 127 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 GSDMAQ96QA5 445 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 GOPCQ9HD26 462 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 RIC8AQ9NPQ8 531 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 LTBP3Q9NS15 1303 aa12.62□□□□□ -0.39
SKA2-204ENST00000578519 CDK5RAP2Q96SN8 1893 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 TCP10L2B9ZVM9 353 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 RAD21O60216 631 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 CACNB3P54284 484 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 AMPD3Q01432 767 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 IKQ13123 557 aaPredicted RBP12.61□□□□□ -0.39
SKA2-204ENST00000578519 INF2Q27J81 1249 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 EARS2Q5JPH6 523 aaKnown RBP12.61□□□□□ -0.39
SKA2-204ENST00000578519 NT5DC1Q5TFE4 455 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 C11orf57Q6ZUT1 292 aaPredicted RBP12.61□□□□□ -0.39
SKA2-204ENST00000578519 ZFPM1Q8IX07 1006 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 AOPEPQ8N6M6 819 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
SKA2-204ENST00000578519 DHX58Q96C10 678 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 JMJD4Q9H9V9 463 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 PCDHA5Q9Y5H7 936 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
SKA2-204ENST00000578519 FAM205CA6NFA0 338 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 F5H6K3 240 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 SLC26A4O43511 780 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
SKA2-204ENST00000578519 MARCH6O60337 910 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 CCNT1O60563 726 aaKnown RBP12.6□□□□□ -0.39
SKA2-204ENST00000578519 FOSP01100 380 aaPredicted RBP12.6□□□□□ -0.39
SKA2-204ENST00000578519 OR52Z1P0C646 297 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 BMP3P12645 472 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 ERCC5P28715 1186 aaPredicted RBP12.6□□□□□ -0.39
SKA2-204ENST00000578519 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
SKA2-204ENST00000578519 MYL5Q02045 173 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 KLRC3Q07444 240 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 PNOCQ13519 176 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 SEPT2Q15019 361 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 RRAGBQ5VZM2 374 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 SH3BP5LQ7L8J4 393 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 PLA2G4DQ86XP0 818 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 PDILTQ8N807 584 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 CHURC1Q8WUH1 139 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 DPF2Q92785 391 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 MTMR8Q96EF0 704 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 CALML4Q96GE6 196 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 VEZTQ9HBM0 779 aa12.6□□□□□ -0.39
SKA2-204ENST00000578519 BIN1O00499 593 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
SKA2-204ENST00000578519 GH2P01242 217 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 PPP1R2P41236 205 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 STAT6P42226 847 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 SARSP49591 514 aaKnown RBP12.59□□□□□ -0.39
SKA2-204ENST00000578519 GSDMDP57764 484 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 CXCL9Q07325 125 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 AP3B2Q13367 1082 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 FAM160B2Q86V87 743 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 DHX40Q8IX18 779 aaKnown RBP12.59□□□□□ -0.39
SKA2-204ENST00000578519 TBCKQ8TEA7 893 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
SKA2-204ENST00000578519 DNAJC18Q9H819 358 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 PPP1R1BQ9UD71 204 aaPredicted RBP12.59□□□□□ -0.39
SKA2-204ENST00000578519 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
SKA2-204ENST00000578519 CLRN2A0PK11 232 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 ZNF500O60304 480 aaPredicted RBP12.58□□□□□ -0.4
SKA2-204ENST00000578519 VEGFAP15692 232 aaPredicted RBP12.58□□□□□ -0.4
SKA2-204ENST00000578519 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 DPCR1Q3MIW9 517 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 SYDE2Q5VT97 1194 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 JAKMIP3Q5VZ66 844 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 TYW1BQ6NUM6 668 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 KCTD1Q719H9 257 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 SH3RF1Q7Z6J0 888 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 C4orf32Q8N8J7 132 aa12.58□□□□□ -0.4
SKA2-204ENST00000578519 COA7Q96BR5 231 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms