RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 CASZ1Q86V15 1759 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 LAMA4Q16363 1823 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 ABCC12Q96J65 1359 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 USP27XA6NNY8 438 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PDE8AO60658 829 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 FSBPO95073 299 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 S100BP04271 92 aaPredicted RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 IFIT1P09914 478 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 SYT1P21579 422 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MCM3P25205 808 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 CRKLP46109 303 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 EIF1AXP47813 144 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 AARSP49588 968 aaKnown RBP eCLIP7.83□□□□□ -1.16
KRT39-203ENST00000578078 AK2P54819 239 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 EVCP57679 992 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 TIMM10P62072 90 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 BIRC2Q13490 618 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 SLMAPQ14BN4 828 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 VPS72Q15906 364 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 STX1AQ16623 288 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PTPRNQ16849 979 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MCMDC2Q4G0Z9 681 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 TTC39AQ5SRH9 613 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MORN1Q5T089 497 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 RCSD1Q6JBY9 416 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 LRRC31Q6UY01 552 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 DDX46Q7L014 1031 aaKnown RBP7.83□□□□□ -1.16
KRT39-203ENST00000578078 TAX1BP1Q86VP1 789 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MSANTD4Q8NCY6 345 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PMM1Q92871 262 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 MKL1Q969V6 931 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 NGLY1Q96IV0 654 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 TTC14Q96N46 770 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PAGR1Q9BTK6 254 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 ZSWIM6Q9HCJ5 1215 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PDRG1Q9NUG6 133 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.83□□□□□ -1.16
KRT39-203ENST00000578078 NRBP1Q9UHY1 535 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 GGA2Q9UJY4 613 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 SLC27A5Q9Y2P5 690 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 PRKAB1Q9Y478 270 aa7.83□□□□□ -1.16
KRT39-203ENST00000578078 NHSQ6T4R5 1651 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 RIC1Q4ADV7 1423 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 EBAG9O00559 213 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 SLC27A2O14975 620 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 TAF5LO75529 589 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 IGFBP4P22692 258 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ITGA6P23229 1130 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 SFPQP23246 707 aaKnown RBP eCLIP7.82□□□□□ -1.16
KRT39-203ENST00000578078 PRPHP41219 470 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ARHGAP25P42331 645 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 DRP2Q13474 957 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 KRT32Q14532 448 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 RBBP5Q15291 538 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 FAM98CQ17RN3 349 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 KIF4BQ2VIQ3 1234 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 PARP10Q53GL7 1025 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 PLEKHG4Q58EX7 1191 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 METTL24Q5JXM2 366 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ISM2Q6H9L7 571 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 INTS5Q6P9B9 1019 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 LDHAL6AQ6ZMR3 332 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 RUFY3Q7L099 469 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 KIAA1328Q86T90 577 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ZNF34Q8IZ26 560 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ARMC2Q8NEN0 867 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 TTLL11Q8NHH1 800 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 EDC3Q96F86 508 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 PUS3Q9BZE2 481 aaKnown RBP7.82□□□□□ -1.16
KRT39-203ENST00000578078 CNNM1Q9NRU3 951 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 HELLSQ9NRZ9 838 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 GABBR1Q9UBS5 961 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 SMC3Q9UQE7 1217 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 ZNF652Q9Y2D9 606 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 PARP3Q9Y6F1 533 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 BTAF1O14981 1849 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 SCN7AQ01118 1682 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 THSD7AQ9UPZ6 1657 aa7.82□□□□□ -1.16
KRT39-203ENST00000578078 BCL9LQ86UU0 1499 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 PNMA6FA0A0J9YX94 578 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 MPHOSPH10O00566 681 aaKnown RBP7.81□□□□□ -1.16
KRT39-203ENST00000578078 FIBPO43427 364 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 ZEB2O60315 1214 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 MTA1Q13330 715 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 ANKRD1Q15327 319 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 WWC2Q6AWC2 1192 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 ALKBH2Q6NS38 261 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 BLOC1S2Q6QNY1 142 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 B4GALNT4Q76KP1 1039 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 ZNF589Q86UQ0 364 aaPredicted RBP7.81□□□□□ -1.16
KRT39-203ENST00000578078 KHSRPQ92945 711 aaKnown RBP eCLIP7.81□□□□□ -1.16
KRT39-203ENST00000578078 XAGE2Q96GT9 111 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 RNPC3Q96LT9 517 aaKnown RBP7.81□□□□□ -1.16
KRT39-203ENST00000578078 GREM2Q9H772 168 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 ANO10Q9NW15 660 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 L1RE1Q9UN81 338 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 G3BP2Q9UN86 482 aaKnown RBP7.81□□□□□ -1.16
KRT39-203ENST00000578078 MRFAP1Q9Y605 127 aa7.81□□□□□ -1.16
KRT39-203ENST00000578078 SPATA31A6Q5VVP1 1343 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms