RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 CTCFLQ8NI51 663 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ARMC5Q96C12 935 aa14.82□□□□□ -0.04
CDK5RAP3-203ENST00000577442 MAP3K14Q99558 947 aa14.82□□□□□ -0.04
CDK5RAP3-203ENST00000577442 DHX16O60231 1041 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ICAM1P05362 532 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ANAPC15P60006 121 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 UBXN2AP68543 259 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 EXOSC10Q01780 885 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 KCTD2Q14681 263 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CCDC174Q6PII3 467 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 NUP133Q8WUM0 1156 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 USP6NLQ92738 828 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 MMP19Q99542 508 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 LRRC2Q9BYS8 371 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ACAD9Q9H845 621 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SENP2Q9HC62 589 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CCPG1Q9ULG6 757 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SLC12A7Q9Y666 1083 aa14.81□□□□□ -0.04
CDK5RAP3-203ENST00000577442 PALM3A6NDB9 673 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 KLRF2D3W0D1 207 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 HMGCRP04035 888 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 HOXC6P09630 235 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CASTP20810 708 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CYP2B6P20813 491 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 RPS6KB1P23443 525 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ADORA2AP29274 412 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SLC4A3P48751 1232 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 GNAQP50148 359 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 LZTS2Q9BRK4 669 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 TM6SF1Q9BZW5 370 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 UBA5Q9GZZ9 404 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 RNF146Q9NTX7 359 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 BIN2Q9UBW5 565 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 MAD2L2Q9UI95 211 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ZNF536O15090 1300 aa14.8□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SMCHD1A6NHR9 2005 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ALAS1P13196 640 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 RCAN1P53805 252 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 TRAF1Q13077 416 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CDC37Q16543 378 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 DPP9Q86TI2 863 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ADGRF4Q8IZF3 695 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ZNF333Q96JL9 665 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 AGBL1Q96MI9 1066 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 TCEANC2Q96MN5 208 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 HOMER2Q9NSB8 354 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 RIPK3Q9Y572 518 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CYP46A1Q9Y6A2 500 aa14.79□□□□□ -0.04
CDK5RAP3-203ENST00000577442 PLXNA1Q9UIW2 1896 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 PFASO15067 1338 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 INHAP05111 366 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ELNP15502 786 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SNAP25P60880 206 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 COL9A3Q14050 684 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 C8orf34Q49A92 452 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 APOA5Q6Q788 366 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 MICU3Q86XE3 530 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 STAG2Q8N3U4 1231 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 FBXL16Q8N461 479 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 SH3TC2Q8TF17 1288 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 DDX11Q96FC9 970 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 TRERF1Q96PN7 1200 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CPVLQ9H3G5 476 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 ZSWIM6Q9HCJ5 1215 aa14.78□□□□□ -0.04
CDK5RAP3-203ENST00000577442 CCDC85CA6NKD9 419 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 ZBTB43O43298 467 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 SMARCA1P28370 1054 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 MFSD14CQ5VZR4 134 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 Q6ZUG5 572 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 ANKRD35Q8N283 1001 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 MYL10Q9BUA6 226 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 SPZ1Q9BXG8 430 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 JMJD4Q9H9V9 463 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 RBM28Q9NW13 759 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 DIS3Q9Y2L1 958 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 CENPFP49454 3210 aa14.77□□□□□ -0.05
CDK5RAP3-203ENST00000577442 ABCB11O95342 1321 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 KLF18A0A0U1RQI7 1052 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 ZBTB5O15062 677 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 CPA1P15085 419 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 QRICH1Q2TAL8 776 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 OLFML2BQ68BL8 750 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 FBXO11Q86XK2 927 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 TRIB2Q92519 343 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 BRF1Q92994 677 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 TMEM106CQ9BVX2 250 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 MAF1Q9H063 256 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 RIOX1Q9H6W3 641 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 VAT1LQ9HCJ6 419 aa14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 NAP1L2Q9ULW6 460 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-203ENST00000577442 RBBP6Q7Z6E9 1792 aaKnown RBP14.75□□□□□ -0.05
CDK5RAP3-203ENST00000577442 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
CDK5RAP3-203ENST00000577442 GOLGA8BA8MQT2 603 aa14.75□□□□□ -0.05
CDK5RAP3-203ENST00000577442 COBLO75128 1261 aa14.75□□□□□ -0.05
CDK5RAP3-203ENST00000577442 PPP2R5BQ15173 497 aa14.75□□□□□ -0.05
CDK5RAP3-203ENST00000577442 RTN1Q16799 776 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms