RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 STAG2Q8N3U4 1231 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 CHST13Q8NET6 341 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 TMEM87BQ96K49 555 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 UNC93B1Q9H1C4 597 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 LY9Q9HBG7 655 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 FLRT1Q9NZU1 646 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 SNX14Q9Y5W7 946 aa18.34■□□□□ 0.53
NCBP3-207ENST00000577169 PGK2P07205 417 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 ALAS1P13196 640 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.52
NCBP3-207ENST00000577169 KRT32Q14532 448 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 TMTC2Q8N394 836 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 RNF208Q9H0X6 261 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 HOMER2Q9NSB8 354 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 MAD2L2Q9UI95 211 aa18.33■□□□□ 0.52
NCBP3-207ENST00000577169 PALM3A6NDB9 673 aaPredicted RBP18.32■□□□□ 0.52
NCBP3-207ENST00000577169 SH2B2O14492 632 aaPredicted RBP18.32■□□□□ 0.52
NCBP3-207ENST00000577169 EPB41L2O43491 1005 aaKnown RBP18.32■□□□□ 0.52
NCBP3-207ENST00000577169 ICAM1P05362 532 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 TROAPQ12815 778 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 DHX32Q7L7V1 743 aaKnown RBP18.32■□□□□ 0.52
NCBP3-207ENST00000577169 CATIPQ7Z7H3 387 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 ADGRF4Q8IZF3 695 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 DDX11Q96FC9 970 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 SLC5A4Q9NY91 659 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 FBXO40Q9UH90 709 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 CCPG1Q9ULG6 757 aa18.32■□□□□ 0.52
NCBP3-207ENST00000577169 KLRF2D3W0D1 207 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
NCBP3-207ENST00000577169 EN2P19622 333 aaPredicted RBP18.31■□□□□ 0.52
NCBP3-207ENST00000577169 LIFRP42702 1097 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
NCBP3-207ENST00000577169 GRM4Q14833 912 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 ZNF792Q3KQV3 632 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 MUM1L1Q5H9M0 696 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 NFXL1Q6ZNB6 911 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 ZNF654Q8IZM8 581 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 ANKRD35Q8N283 1001 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 NUP133Q8WUM0 1156 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 TCEANC2Q96MN5 208 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 SMCHD1A6NHR9 2005 aa18.31■□□□□ 0.52
NCBP3-207ENST00000577169 RPTORQ8N122 1335 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 CCDC69A6NI79 296 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 CPA1P15085 419 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 RGS19P49795 217 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.3■□□□□ 0.52
NCBP3-207ENST00000577169 JAKMIP1Q96N16 626 aaKnown RBP18.3■□□□□ 0.52
NCBP3-207ENST00000577169 MYL10Q9BUA6 226 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 JMJD4Q9H9V9 463 aa18.3■□□□□ 0.52
NCBP3-207ENST00000577169 HMX1Q9NP08 348 aaPredicted RBP18.3■□□□□ 0.52
NCBP3-207ENST00000577169 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
NCBP3-207ENST00000577169 WDR19Q8NEZ3 1342 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 ZNF236Q9UL36 1845 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 DNAJC25-GNG10A0A024R161 153 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 DHX16O60231 1041 aaKnown RBP18.29■□□□□ 0.52
NCBP3-207ENST00000577169 IGHA2P01877 340 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 GJB1P08034 283 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
NCBP3-207ENST00000577169 PRKAR2AP13861 404 aaKnown RBP18.29■□□□□ 0.52
NCBP3-207ENST00000577169 CYP2C19P33261 490 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 MAP3K21Q5TCX8 1036 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 OLFML2BQ68BL8 750 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 MAML3Q96JK9 1138 aa18.29■□□□□ 0.52
NCBP3-207ENST00000577169 CDC37Q16543 378 aaPredicted RBP18.28■□□□□ 0.52
NCBP3-207ENST00000577169 MAP3K14Q99558 947 aa18.28■□□□□ 0.52
NCBP3-207ENST00000577169 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
NCBP3-207ENST00000577169 DDAH1O94760 285 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 SGPL1O95470 568 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 CCND3P30281 292 aaPredicted RBP18.27■□□□□ 0.52
NCBP3-207ENST00000577169 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 QRICH1Q2TAL8 776 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 PRAMEF19Q5SWL8 479 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 DEFB118Q96PH6 123 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 RIOX1Q9H6W3 641 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 A1CFQ9NQ94 594 aaKnown RBP18.27■□□□□ 0.52
NCBP3-207ENST00000577169 PAK6Q9NQU5 681 aaPredicted RBP18.27■□□□□ 0.52
NCBP3-207ENST00000577169 PNMA2Q9UL42 364 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 SLC12A7Q9Y666 1083 aa18.27■□□□□ 0.52
NCBP3-207ENST00000577169 PLXNA1Q9UIW2 1896 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 RXRAP19793 462 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 PSMA5P28066 241 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 GJA8P48165 433 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 CNTN2Q02246 1040 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 USH1GQ495M9 461 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 CTCFLQ8NI51 663 aaPredicted RBP18.26■□□□□ 0.51
NCBP3-207ENST00000577169 U2AF1L4Q8WU68 220 aaKnown RBP18.26■□□□□ 0.51
NCBP3-207ENST00000577169 CLEC4DQ8WXI8 215 aa18.26■□□□□ 0.51
NCBP3-207ENST00000577169 MTMR8Q96EF0 704 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms