RNA–Protein interactions for RNA: ENST00000576979.1

CTNS-210, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-210ENST00000576979 LEMD3Q9Y2U8 911 aa6.69□□□□□ -1.34
CTNS-210ENST00000576979 NUP188Q5SRE5 1749 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 GCP02774 474 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 PRNPP04156 253 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 FOSL1P15407 271 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 TCF3P15923 654 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 JUNBP17275 347 aaPredicted RBP6.68□□□□□ -1.34
CTNS-210ENST00000576979 RPS6KB1P23443 525 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 SOX18P35713 384 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 HMGN5P82970 282 aaKnown RBP6.68□□□□□ -1.34
CTNS-210ENST00000576979 CHAF1AQ13111 956 aaPredicted RBP6.68□□□□□ -1.34
CTNS-210ENST00000576979 MAP3K11Q16584 847 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 ME3Q16798 604 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 PROSER3Q2NL68 480 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 ADCK5Q3MIX3 580 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 TMEM164Q5U3C3 297 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 PIBF1Q8WXW3 757 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 RAPGEF4Q8WZA2 1011 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 PRIMPOLQ96LW4 560 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 HINFPQ9BQA5 517 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 SCAND2PQ9GZW5 306 aaPredicted RBP6.68□□□□□ -1.34
CTNS-210ENST00000576979 NUP62CLQ9H1M0 184 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 BOLA2Q9H3K6 86 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 KIF3AQ9Y496 699 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 KCNMB2Q9Y691 235 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 ELP1O95163 1332 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 MED23Q9ULK4 1368 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 ADAMTSL3P82987 1691 aa6.68□□□□□ -1.34
CTNS-210ENST00000576979 NPHP4O75161 1426 aaPredicted RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 COL18A1P39060 1754 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 A0A0D9SFI3 127 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 DBX1A6NMT0 343 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 SASH1O94885 1247 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 PAPLNO95428 1278 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 ZNF16P17020 682 aaPredicted RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 RBM10P98175 930 aaKnown RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 SGO2Q562F6 1265 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 CEP135Q66GS9 1140 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 GIMAP6Q6P9H5 292 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 VSIG10LQ86VR7 867 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 TTC5Q8N0Z6 440 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 NECAB1Q8N987 351 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 STK32AQ8WU08 396 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 CHMP4CQ96CF2 233 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 EAF2Q96CJ1 260 aaPredicted RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 KLHDC7BQ96G42 594 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 SPATA32Q96LK8 384 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 FBXL18Q96ME1 805 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 MYD88Q99836 296 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 METTL22Q9BUU2 404 aaPredicted RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 SIL1Q9H173 461 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 ATG3Q9NT62 314 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 DDX19AQ9NUU7 478 aaKnown RBP6.67□□□□□ -1.34
CTNS-210ENST00000576979 FAM13BQ9NYF5 915 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 ZMIZ1Q9ULJ6 1067 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 CHD4Q14839 1912 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 PLEKHG2Q9H7P9 1386 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 JCADQ9P266 1359 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 TJP1Q07157 1748 aa6.67□□□□□ -1.34
CTNS-210ENST00000576979 H3BQV1 296 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 MYL6BP14649 208 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 ATP5JP18859 108 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 EPHA1P21709 976 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 CDC27P30260 824 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 SEC13P55735 322 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 FGD1P98174 961 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 GCKRQ14397 625 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
CTNS-210ENST00000576979 ZNF790Q6PG37 636 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 KRT28Q7Z3Y7 464 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 MYRIPQ8NFW9 859 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 BICD2Q8TD16 824 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
CTNS-210ENST00000576979 XAGE3Q8WTP9 111 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 FUCA2Q9BTY2 467 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 TNMDQ9H2S6 317 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 SLC52A2Q9HAB3 445 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 COPRSQ9NQ92 184 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 TPCN1Q9ULQ1 816 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 NOVA2Q9UNW9 492 aaKnown RBP6.66□□□□□ -1.34
CTNS-210ENST00000576979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
CTNS-210ENST00000576979 NPHP3Q7Z494 1330 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 COL15A1P39059 1388 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 MYH3P11055 1940 aa6.66□□□□□ -1.34
CTNS-210ENST00000576979 UBR2Q8IWV8 1755 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 PRAMEF22A3QJZ6 481 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 IGKV5-2P06315 115 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 SNRPA1P09661 255 aaKnown RBP6.65□□□□□ -1.34
CTNS-210ENST00000576979 MAP4P27816 1152 aaKnown RBP6.65□□□□□ -1.34
CTNS-210ENST00000576979 ST3GAL1Q11201 340 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 STK3Q13188 491 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 TNNI3KQ59H18 835 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 CDC37L1Q7L3B6 337 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 COPS6Q7L5N1 327 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 TTC6Q86TZ1 520 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 FERMT3Q86UX7 667 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 DRC7Q8IY82 874 aa6.65□□□□□ -1.34
CTNS-210ENST00000576979 IFNL2Q8IZJ0 200 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms