RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 HOMER1Q86YM7 354 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 TNS4Q8IZW8 715 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 PRPF38AQ8NAV1 312 aaKnown RBP9.23□□□□□ -0.93
CCDC40-215ENST00000576033 NPLOC4Q8TAT6 608 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 TRIB2Q92519 343 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 TTC14Q96N46 770 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 KIF2CQ99661 725 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 C22orf23Q9BZE7 217 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 JMJD4Q9H9V9 463 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 SRRDQ9UH36 339 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 GJD2Q9UKL4 321 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 ASTN1O14525 1302 aa9.23□□□□□ -0.93
CCDC40-215ENST00000576033 PALM3A6NDB9 673 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-215ENST00000576033 CCDC69A6NI79 296 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 KLRF2D3W0D1 207 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 COBLO75128 1261 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 ALAS1P13196 640 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 PTGS1P23219 599 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 ADORA2AP29274 412 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 STAT3P40763 770 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 KRT32Q14532 448 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 MTFR1Q15390 333 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 QRICH1Q2TAL8 776 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 ASPRV1Q53RT3 343 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 MORN1Q5T089 497 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 SLC30A10Q6XR72 485 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 PLEKHH3Q7Z736 793 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 CATIPQ7Z7H3 387 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 FAM160B2Q86V87 743 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 RIOX2Q8IUF8 465 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 CCDC82Q8N4S0 544 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 SRBD1Q8N5C6 995 aaKnown RBP9.22□□□□□ -0.93
CCDC40-215ENST00000576033 USP6NLQ92738 828 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 ABHD8Q96I13 439 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 TMEM87BQ96K49 555 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 FGD4Q96M96 766 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 PIGSQ96S52 555 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 NCOA5Q9HCD5 579 aaKnown RBP9.22□□□□□ -0.93
CCDC40-215ENST00000576033 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 RNF146Q9NTX7 359 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 FAM217BQ9NTX9 383 aaPredicted RBP9.22□□□□□ -0.93
CCDC40-215ENST00000576033 HOXC10Q9NYD6 342 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 CCPG1Q9ULG6 757 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 CNTNAP5Q8WYK1 1306 aa9.22□□□□□ -0.93
CCDC40-215ENST00000576033 GOLGA8AA7E2F4 631 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 OPLAHO14841 1288 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 ADAMTS3O15072 1205 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 TNRC18O15417 2968 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 EPB41L2O43491 1005 aaKnown RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 DHX16O60231 1041 aaKnown RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 ZBED4O75132 1171 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 DDAH1O94760 285 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 PTPREP23469 700 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 CCT2P78371 535 aaKnown RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 STK3Q13188 491 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 GRB14Q14449 540 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 KIF22Q14807 665 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 SART3Q15020 963 aaKnown RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 FBXO46Q6PJ61 603 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 RUFY3Q7L099 469 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 MB21D1Q8N884 522 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 GTF3C2Q8WUA4 911 aaPredicted RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 TEX13BQ9BXU2 312 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 CWC22Q9HCG8 908 aaKnown RBP9.21□□□□□ -0.94
CCDC40-215ENST00000576033 SLC12A7Q9Y666 1083 aa9.21□□□□□ -0.94
CCDC40-215ENST00000576033 ZBTB43O43298 467 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 ADCY3O60266 1144 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 PLA2G6O60733 806 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 INHAP05111 366 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 ICAM1P05362 532 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 MAPK4P31152 587 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CYP2C19P33261 490 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 LIFRP42702 1097 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 AK2P54819 239 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 SOX10P56693 466 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CNTN2Q02246 1040 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 ST3GAL1Q11201 340 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 GPATCH4Q5T3I0 446 aaKnown RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 TMTC3Q6ZXV5 915 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 SGMS1Q86VZ5 419 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 RAET1EQ8TD07 263 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CHURC1Q8WUH1 139 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 CLEC4DQ8WXI8 215 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 GPKOWQ92917 476 aaPredicted RBP eCLIP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 COA7Q96BR5 231 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 LENG1Q96BZ8 264 aaPredicted RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 SHISA4Q96DD7 197 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 MMP19Q99542 508 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 AGXT2Q9BYV1 514 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 A1CFQ9NQ94 594 aaKnown RBP9.2□□□□□ -0.94
CCDC40-215ENST00000576033 PDRG1Q9NUG6 133 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 COL20A1Q9P218 1284 aa9.2□□□□□ -0.94
CCDC40-215ENST00000576033 PCDH10Q9P2E7 1040 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms