RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 KCTD2Q14681 263 aa15.54■□□□□ 0.08
RPAIN-216ENST00000575599 IFIT1BQ5T764 474 aaKnown RBP15.54■□□□□ 0.08
RPAIN-216ENST00000575599 CCDC174Q6PII3 467 aa15.54■□□□□ 0.08
RPAIN-216ENST00000575599 HOMER2Q9NSB8 354 aa15.54■□□□□ 0.08
RPAIN-216ENST00000575599 FLRT1Q9NZU1 646 aa15.54■□□□□ 0.08
RPAIN-216ENST00000575599 SLC27A2O14975 620 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 ATP2A1O14983 1001 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 COBLO75128 1261 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 PGK2P07205 417 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 GJB1P08034 283 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 HOXC6P09630 235 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 GOLGA8HP0CJ92 632 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 FDX1P10109 184 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 OAZ1P54368 228 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 ZNF543Q08ER8 600 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 SYDE2Q5VT97 1194 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 CHST3Q7LGC8 479 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 ABRAQ8N0Z2 381 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 DEFB118Q96PH6 123 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.53■□□□□ 0.08
RPAIN-216ENST00000575599 HMX1Q9NP08 348 aaPredicted RBP15.53■□□□□ 0.08
RPAIN-216ENST00000575599 SLC5A4Q9NY91 659 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 RPTORQ8N122 1335 aa15.53■□□□□ 0.08
RPAIN-216ENST00000575599 ERICH2A1L162 156 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 IFIT3O14879 490 aaKnown RBP15.52■□□□□ 0.08
RPAIN-216ENST00000575599 SNHG28P0DPA3 235 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 CACNB2Q08289 660 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-216ENST00000575599 MFSD14CQ5VZR4 134 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 CREB3L3Q68CJ9 461 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 U2AF1L4Q8WU68 220 aaKnown RBP15.52■□□□□ 0.08
RPAIN-216ENST00000575599 ANKS1AQ92625 1134 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 SHISA4Q96DD7 197 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 AGBL1Q96MI9 1066 aa15.52■□□□□ 0.08
RPAIN-216ENST00000575599 PAK6Q9NQU5 681 aaPredicted RBP15.52■□□□□ 0.08
RPAIN-216ENST00000575599 ZNF536O15090 1300 aa15.52■□□□□ 0.07
RPAIN-216ENST00000575599 TAL1P17542 331 aaPredicted RBP15.51■□□□□ 0.07
RPAIN-216ENST00000575599 CYP2C19P33261 490 aa15.51■□□□□ 0.07
RPAIN-216ENST00000575599 GJA8P48165 433 aa15.51■□□□□ 0.07
RPAIN-216ENST00000575599 SEC23AQ15436 765 aa15.51■□□□□ 0.07
RPAIN-216ENST00000575599 MAP3K21Q5TCX8 1036 aa15.51■□□□□ 0.07
RPAIN-216ENST00000575599 BTNL9Q6UXG8 535 aa15.51■□□□□ 0.07
RPAIN-216ENST00000575599 ZNFX1Q9P2E3 1918 aaKnown RBP15.51■□□□□ 0.07
RPAIN-216ENST00000575599 ALAS1P13196 640 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 CCND3P30281 292 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-216ENST00000575599 SART3Q15020 963 aaKnown RBP15.5■□□□□ 0.07
RPAIN-216ENST00000575599 NECTIN1Q15223 517 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 GPATCH4Q5T3I0 446 aaKnown RBP15.5■□□□□ 0.07
RPAIN-216ENST00000575599 MB21D2Q8IYB1 491 aaPredicted RBP15.5■□□□□ 0.07
RPAIN-216ENST00000575599 CHST13Q8NET6 341 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 DDX11Q96FC9 970 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 MAML3Q96JK9 1138 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 RANBP17Q9H2T7 1088 aaKnown RBP15.5■□□□□ 0.07
RPAIN-216ENST00000575599 CPVLQ9H3G5 476 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 RNF146Q9NTX7 359 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 FBXO40Q9UH90 709 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 CCPG1Q9ULG6 757 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 PLXNA1Q9UIW2 1896 aa15.5■□□□□ 0.07
RPAIN-216ENST00000575599 SGPL1O95470 568 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 TFRCP02786 760 aaKnown RBP15.49■□□□□ 0.07
RPAIN-216ENST00000575599 PARP1P09874 1014 aaKnown RBP15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ANTXR2P58335 489 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 WTAPQ15007 396 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ASPRV1Q53RT3 343 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 TMEM67Q5HYA8 995 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 RNF20Q5VTR2 975 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 OLFML2BQ68BL8 750 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ANKRD35Q8N283 1001 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 UBA5Q9GZZ9 404 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ACAD9Q9H845 621 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 SENP2Q9HC62 589 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
RPAIN-216ENST00000575599 DHX16O60231 1041 aaKnown RBP15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ICAM1P05362 532 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 CNGA1P29973 690 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 ZNF792Q3KQV3 632 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 TRERF1Q96PN7 1200 aa15.49■□□□□ 0.07
RPAIN-216ENST00000575599 PRC1O43663 620 aa15.48■□□□□ 0.07
RPAIN-216ENST00000575599 TKFCQ3LXA3 575 aa15.48■□□□□ 0.07
RPAIN-216ENST00000575599 FARP2O94887 1054 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-216ENST00000575599 CYBAP13498 195 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 MCM5P33992 734 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 COL9A3Q14050 684 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-216ENST00000575599 MUM1L1Q5H9M0 696 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 PRAMEF19Q5SWL8 479 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 STAG2Q8N3U4 1231 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 TRPV1Q8NER1 839 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 CRISPLD2Q9H0B8 497 aa15.47■□□□□ 0.07
RPAIN-216ENST00000575599 A1CFQ9NQ94 594 aaKnown RBP15.47■□□□□ 0.07
RPAIN-216ENST00000575599 GPHNQ9NQX3 736 aaPredicted RBP15.47■□□□□ 0.07
RPAIN-216ENST00000575599 DIS3Q9Y2L1 958 aaKnown RBP15.47■□□□□ 0.07
RPAIN-216ENST00000575599 DNAJC25-GNG10A0A024R161 153 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 IGHA2P01877 340 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 CDC37Q16543 378 aaPredicted RBP15.46■□□□□ 0.07
RPAIN-216ENST00000575599 USH1GQ495M9 461 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.46■□□□□ 0.07
RPAIN-216ENST00000575599 CATIPQ7Z7H3 387 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 ADGRF4Q8IZF3 695 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 IGDCC4Q8TDY8 1250 aa15.46■□□□□ 0.07
RPAIN-216ENST00000575599 TINF2Q9BSI4 451 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms