RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
TVP23B-208ENST00000575261 GLT1D1Q96MS3 346 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 TOX2Q96NM4 488 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 SEC62Q99442 399 aaKnown RBP12.42□□□□□ -0.42
TVP23B-208ENST00000575261 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 SPC25Q9HBM1 224 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 TMEM39AQ9NV64 488 aa12.42□□□□□ -0.42
TVP23B-208ENST00000575261 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.42□□□□□ -0.42
TVP23B-208ENST00000575261 ISY1Q9ULR0 285 aaKnown RBP12.42□□□□□ -0.42
TVP23B-208ENST00000575261 LRRC37A2A6NM11 1700 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 DCDC2CA8MYV0 355 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 C6orf222P0C671 652 aaPredicted RBP12.41□□□□□ -0.42
TVP23B-208ENST00000575261 FPGSQ05932 587 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 PPARAQ07869 468 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 IKQ13123 557 aaPredicted RBP12.41□□□□□ -0.42
TVP23B-208ENST00000575261 KCNA10Q16322 511 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 PCSK9Q8NBP7 692 aaKnown RBP12.41□□□□□ -0.42
TVP23B-208ENST00000575261 GMCL1Q96IK5 515 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 FGD4Q96M96 766 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 ACAD9Q9H845 621 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 HOMER2Q9NSB8 354 aa12.41□□□□□ -0.42
TVP23B-208ENST00000575261 ELP1O95163 1332 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 TMEM265A0A087WTH1 108 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 MYADML2A6NDP7 307 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 MX1P20591 662 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 SLC1A4P43007 532 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 TFAP4Q01664 338 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 FAAP100Q0VG06 881 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 ZMYM1Q5SVZ6 1142 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
TVP23B-208ENST00000575261 FAM160B2Q86V87 743 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 CHURC1Q8WUH1 139 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 CDX2Q99626 313 aaPredicted RBP12.4□□□□□ -0.42
TVP23B-208ENST00000575261 UPF3AQ9H1J1 476 aaKnown RBP12.4□□□□□ -0.42
TVP23B-208ENST00000575261 SEMA6BQ9H3T3 888 aa12.4□□□□□ -0.42
TVP23B-208ENST00000575261 TSPY2A6NKD2 308 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 ADCY6O43306 1168 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 ASGR1P07306 291 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 EPHB4P54760 987 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 GJA9P57773 515 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 FAM133AQ8N9E0 248 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 OTUD7AQ8TE49 926 aaPredicted RBP12.39□□□□□ -0.43
TVP23B-208ENST00000575261 TTYH1Q9H313 450 aaPredicted RBP12.39□□□□□ -0.43
TVP23B-208ENST00000575261 A1CFQ9NQ94 594 aaKnown RBP12.39□□□□□ -0.43
TVP23B-208ENST00000575261 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 TBX21Q9UL17 535 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 CHD9Q3L8U1 2897 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 MUC3AQ02505 3323 aa12.39□□□□□ -0.43
TVP23B-208ENST00000575261 A0A0U1RQG5 324 aaPredicted RBP12.38□□□□□ -0.43
TVP23B-208ENST00000575261 PLA2G6O60733 806 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 TIMP1P01033 207 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 CCDC174Q6PII3 467 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 MAFAQ8NHW3 353 aaPredicted RBP12.38□□□□□ -0.43
TVP23B-208ENST00000575261 STAG1Q8WVM7 1258 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 VTI1AQ96AJ9 217 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
TVP23B-208ENST00000575261 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
TVP23B-208ENST00000575261 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
TVP23B-208ENST00000575261 ZNF536O15090 1300 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 ASB14A6NK59 587 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 ALAS1P13196 640 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 FOSL2P15408 326 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 MCCP23508 829 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 CDK7P50613 346 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 IRX5P78411 483 aaPredicted RBP12.37□□□□□ -0.43
TVP23B-208ENST00000575261 CNTN2Q02246 1040 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 PPIGQ13427 754 aaKnown RBP eCLIP12.37□□□□□ -0.43
TVP23B-208ENST00000575261 GNASQ5JWF2 1037 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 MFSD5Q6N075 450 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 CCDC129Q6ZRS4 1044 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 KCTD1Q719H9 257 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 AGBL1Q96MI9 1066 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 TRERF1Q96PN7 1200 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
TVP23B-208ENST00000575261 SALL3Q9BXA9 1300 aa12.37□□□□□ -0.43
TVP23B-208ENST00000575261 ARVCFO00192 962 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 FOXP2O15409 715 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 TLR3O15455 904 aaKnown RBP12.36□□□□□ -0.43
TVP23B-208ENST00000575261 DNAJB2P25686 324 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 NKX3-2P78367 333 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 TNFAIP2Q03169 654 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
TVP23B-208ENST00000575261 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 FAM126BQ8IXS8 530 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 CHMP4CQ96CF2 233 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 IL17RBQ9NRM6 502 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 ANAPC4Q9UJX5 808 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
TVP23B-208ENST00000575261 LCTP09848 1927 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 CHD7Q9P2D1 2997 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms