RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NOVP48745 357 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 TTBK2Q6IQ55 1244 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 TRERF1Q96PN7 1200 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 DSCC1Q9BVC3 393 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 XPNPEP3Q9NQH7 507 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 NRBP1Q9UHY1 535 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 ZHX1Q9UKY1 873 aaPredicted RBP14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 ALPK3Q96L96 1907 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 ZNF536O15090 1300 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 DNAJC25-GNG10A0A024R161 153 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 KDM4AO75164 1064 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 AKR1A1P14550 325 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 CCPG1Q9ULG6 757 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 PLXNA1Q9UIW2 1896 aa14.94□□□□□ -0.02
NPLOC4-213ENST00000573519 SYNGAP1Q96PV0 1343 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 B4E1Z4 1266 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 POTEB2H3BUK9 544 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 ZNF865P0CJ78 1059 aaPredicted RBP14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 FXR1P51114 621 aaKnown RBP eCLIP14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 SYDE2Q5VT97 1194 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 IQCA1Q86XH1 822 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 MSL3Q8N5Y2 521 aaKnown RBP14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 LENG1Q96BZ8 264 aaPredicted RBP14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 TTC14Q96N46 770 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 IL25Q9H293 177 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 ZNFX1Q9P2E3 1918 aaKnown RBP14.93□□□□□ -0.02
NPLOC4-213ENST00000573519 SNAI1O95863 264 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 PGK1P00558 417 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 ICAM1P05362 532 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 PDHBP11177 359 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 ADCYAP1R1P41586 468 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 CNTN2Q02246 1040 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 LRRC41Q15345 812 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 MUM1L1Q5H9M0 696 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 ZNF467Q7Z7K2 595 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 RNF180Q86T96 592 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 SKAP1Q86WV1 359 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 KAT14Q9H8E8 782 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 A1CFQ9NQ94 594 aaKnown RBP14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 FAM184BQ9ULE4 1060 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 ATP11BQ9Y2G3 1177 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 RAD50Q92878 1312 aa14.92□□□□□ -0.02
NPLOC4-213ENST00000573519 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 RTP1P59025 263 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 ZNF543Q08ER8 600 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 ACVR2BQ13705 512 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 CCDC178Q5BJE1 867 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 NSMFQ6X4W1 530 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 ARMCX2Q7L311 632 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 DGKHQ86XP1 1220 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 CCDC144CPQ8IYA2 1237 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 ZSCAN10Q96SZ4 725 aaPredicted RBP14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 KRT23Q9C075 422 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 RANBP17Q9H2T7 1088 aaKnown RBP14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 PRO3102Q9H379 93 aa14.91□□□□□ -0.02
NPLOC4-213ENST00000573519 CHMLP26374 656 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 MAGEA10P43363 369 aaPredicted RBP14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 BTNL9Q6UXG8 535 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 SLC39A5Q6ZMH5 540 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 FGD4Q96M96 766 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 UBAC1Q9BSL1 405 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 ABHD16BQ9H3Z7 469 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 CNNM2Q9H8M5 875 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 ZSWIM5Q9P217 1185 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 PRKAG2Q9UGJ0 569 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 TNKSO95271 1327 aa14.9□□□□□ -0.02
NPLOC4-213ENST00000573519 SOWAHBA6NEL2 793 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 NT5C2P49902 561 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 MDM2Q00987 491 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 FAM133AQ8N9E0 248 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 GDF15Q99988 308 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 PRDM5Q9NQX1 630 aaPredicted RBP14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 CYP39A1Q9NYL5 469 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 SYNRGQ9UMZ2 1314 aa14.89□□□□□ -0.03
NPLOC4-213ENST00000573519 PTPDC1A2A3K4 754 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 ASB14A6NK59 587 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 SNHG28P0DPA3 235 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 PTH1RQ03431 593 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 TRDNQ13061 729 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 TRIM60Q495X7 471 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 GPATCH4Q5T3I0 446 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 ENAHQ8N8S7 591 aaPredicted RBP14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 UBE2OQ9C0C9 1292 aaKnown RBP14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 UBA5Q9GZZ9 404 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 CPVLQ9H3G5 476 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 PHF24Q9UPV7 400 aa14.88□□□□□ -0.03
NPLOC4-213ENST00000573519 A0A1W2PPC1 479 aa14.87□□□□□ -0.03
NPLOC4-213ENST00000573519 A0A1W2PQ45 241 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms