RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 SH3TC1Q8TE82 1336 aa11.66□□□□□ -0.54
CHRNB1-205ENST00000573209 GOLGA8AA7E2F4 631 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 GCP02774 474 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 SSBP05455 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 MYCLP1P12525 358 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 SMARCA1P28370 1054 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 USP11P51784 963 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 RESTQ13127 1097 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 XRCC4Q13426 336 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 GCKRQ14397 625 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 ZNF589Q86UQ0 364 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 WDR66Q8TBY9 1149 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 DDX12PQ92771 950 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 NEK1Q96PY6 1258 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 METTL22Q9BUU2 404 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 NRDE2Q9H7Z3 1164 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 DDX25Q9UHL0 483 aaKnown RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 CFAP45Q9UL16 551 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 PPME1Q9Y570 386 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 SKOR1P84550 965 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 USH1GQ495M9 461 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 ESCO1Q5FWF5 840 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 CCDC121Q6ZUS5 278 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 SUGCTQ9HAC7 445 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 PNMA2Q9UL42 364 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 ZNF609O15014 1411 aa11.65□□□□□ -0.54
CHRNB1-205ENST00000573209 TJP1Q07157 1748 aa11.65□□□□□ -0.55
CHRNB1-205ENST00000573209 PRAMEF22A3QJZ6 481 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 P4HA2O15460 535 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 ANP32DO95626 131 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 KIF5BP33176 963 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 LBRQ14739 615 aaKnown RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 CAMK4Q16566 473 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 FNBP4Q8N3X1 1017 aaPredicted RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SMC1BQ8NDV3 1235 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SH3GL2Q99962 352 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 BPIFA3Q9BQP9 254 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SIL1Q9H173 461 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SLC5A4Q9NY91 659 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 HPCAL4Q9UM19 191 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 PALLDQ8WX93 1383 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 KDM6AO15550 1401 aaPredicted RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 MYH7P12883 1935 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 MARCH6O60337 910 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 CUTAO60888 179 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 GFPT2O94808 682 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 TROVE2P10155 538 aaKnown RBP eCLIP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 PDE4BQ07343 736 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 PTK7Q13308 1070 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 RIPK1Q13546 671 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 RABL6Q3YEC7 729 aaPredicted RBP11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SMUG1Q53HV7 270 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 TNNI3KQ59H18 835 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 ZFYVE27Q5T4F4 411 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 ATL3Q6DD88 541 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 WDR93Q6P2C0 686 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 OSBPL10Q9BXB5 764 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 HAUS2Q9NVX0 235 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 SPO11Q9Y5K1 396 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 FPGT-TNNI3KV9GXZ4 949 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 GLI3P10071 1580 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 COL18A1P39060 1754 aa11.64□□□□□ -0.55
CHRNB1-205ENST00000573209 ZNF202O95125 648 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 COPB2P35606 906 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 CLCN2P51788 898 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 NLRP5P59047 1200 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 MRPS35P82673 323 aaKnown RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 AIMP1Q12904 312 aaKnown RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 FXNQ16595 210 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 NBPF14Q5TI25 921 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 NAA16Q6N069 864 aaPredicted RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ARMCX5Q6P1M9 558 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ZNF790Q6PG37 636 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 SESTD1Q86VW0 696 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 CKAP2LQ8IYA6 745 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ANKK1Q8NFD2 765 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 BRF1Q92994 677 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 PGBD1Q96JS3 809 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 TCEANC2Q96MN5 208 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ORAI2Q96SN7 254 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 DMAP1Q9NPF5 467 aaPredicted RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 TAF6LQ9Y6J9 622 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 UBN2Q6ZU65 1347 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 HMGB1P1B2RPK0 211 aaPredicted RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 H3BQV1 296 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 LSM1O15116 133 aaKnown RBP11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ATP9BO43861 1147 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 NR1I2O75469 434 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ABL1P00519 1130 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 ARPC4P59998 168 aa11.63□□□□□ -0.55
CHRNB1-205ENST00000573209 VSNL1P62760 191 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms