RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 SLC16A2P36021 539 aa18.96■□□□□ 0.63
NDE1-205ENST00000572756 SNAP25P60880 206 aa18.96■□□□□ 0.63
NDE1-205ENST00000572756 SYDE2Q5VT97 1194 aa18.96■□□□□ 0.63
NDE1-205ENST00000572756 PAWRQ96IZ0 340 aaKnown RBP18.96■□□□□ 0.63
NDE1-205ENST00000572756 ESYT1Q9BSJ8 1104 aa18.96■□□□□ 0.63
NDE1-205ENST00000572756 DDX20Q9UHI6 824 aaKnown RBP18.96■□□□□ 0.63
NDE1-205ENST00000572756 SLC4A3P48751 1232 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 SEC23AQ15436 765 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 TKFCQ3LXA3 575 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 CYB5R4Q7L1T6 521 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 PNMA1Q8ND90 353 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 TINF2Q9BSI4 451 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 LSG1Q9H089 658 aaKnown RBP18.95■□□□□ 0.62
NDE1-205ENST00000572756 GPCPD1Q9NPB8 672 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 LCTP09848 1927 aa18.95■□□□□ 0.62
NDE1-205ENST00000572756 MSCO60682 206 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 ICAM1P05362 532 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 CCDC174Q6PII3 467 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 STOX1Q6ZVD7 989 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 NECAB2Q7Z6G3 386 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 FGD4Q96M96 766 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 UBAC1Q9BSL1 405 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 HTATIP2Q9BUP3 242 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 ACAD9Q9H845 621 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 KAT14Q9H8E8 782 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 HOMER2Q9NSB8 354 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 RNF146Q9NTX7 359 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 NRBP1Q9UHY1 535 aa18.94■□□□□ 0.62
NDE1-205ENST00000572756 RBM8AQ9Y5S9 174 aaKnown RBP18.94■□□□□ 0.62
NDE1-205ENST00000572756 E7EWF7 191 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 SEPT4O43236 478 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 CNGA1P29973 690 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 PRAMEF19Q5SWL8 479 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 GPATCH4Q5T3I0 446 aaKnown RBP18.93■□□□□ 0.62
NDE1-205ENST00000572756 MAMDC4Q6UXC1 1216 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 ZNF467Q7Z7K2 595 aaPredicted RBP18.93■□□□□ 0.62
NDE1-205ENST00000572756 ANKRD35Q8N283 1001 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 MSL3Q8N5Y2 521 aaKnown RBP18.93■□□□□ 0.62
NDE1-205ENST00000572756 TRERF1Q96PN7 1200 aa18.93■□□□□ 0.62
NDE1-205ENST00000572756 A1CFQ9NQ94 594 aaKnown RBP18.93■□□□□ 0.62
NDE1-205ENST00000572756 COL6A1P12109 1028 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 ALAS1P13196 640 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 TRDNQ13061 729 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 CCPG1Q9ULG6 757 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 SYNGAP1Q96PV0 1343 aa18.92■□□□□ 0.62
NDE1-205ENST00000572756 NEFLP07196 543 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 GOLGA8HP0CJ92 632 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 TAL1P17542 331 aaPredicted RBP18.91■□□□□ 0.62
NDE1-205ENST00000572756 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
NDE1-205ENST00000572756 KIAA1211Q6ZU35 1233 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 FAM133AQ8N9E0 248 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 C11orf49Q9H6J7 331 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 MYH6P13533 1939 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 PFASO15067 1338 aa18.91■□□□□ 0.62
NDE1-205ENST00000572756 SNAI1O95863 264 aaPredicted RBP18.9■□□□□ 0.62
NDE1-205ENST00000572756 ZNF865P0CJ78 1059 aaPredicted RBP18.9■□□□□ 0.62
NDE1-205ENST00000572756 CNTN2Q02246 1040 aa18.9■□□□□ 0.62
NDE1-205ENST00000572756 ASPRV1Q53RT3 343 aa18.9■□□□□ 0.62
NDE1-205ENST00000572756 MB21D2Q8IYB1 491 aaPredicted RBP18.9■□□□□ 0.62
NDE1-205ENST00000572756 NCOA7Q8NI08 942 aa18.9■□□□□ 0.62
NDE1-205ENST00000572756 DPF3Q92784 378 aa18.9■□□□□ 0.62
NDE1-205ENST00000572756 LRRC37A2A6NM11 1700 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 ANTXR2P58335 489 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 NECTIN1Q15223 517 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
NDE1-205ENST00000572756 UBA5Q9GZZ9 404 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 CPVLQ9H3G5 476 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 WDR19Q8NEZ3 1342 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 DNAH12Q6ZR08 3092 aa18.89■□□□□ 0.61
NDE1-205ENST00000572756 SOWAHBA6NEL2 793 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 H0YGN5 161 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 SLC27A2O14975 620 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 ANO1Q5XXA6 986 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 SENP2Q9HC62 589 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 ANO2Q9NQ90 1003 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 PNMA2Q9UL42 364 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 ASTN1O14525 1302 aa18.88■□□□□ 0.61
NDE1-205ENST00000572756 DNM1LO00429 736 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 NFIBO00712 420 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 IFIT3O14879 490 aaKnown RBP18.87■□□□□ 0.61
NDE1-205ENST00000572756 CDC45O75419 566 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 PARP1P09874 1014 aaKnown RBP18.87■□□□□ 0.61
NDE1-205ENST00000572756 CREB3L3Q68CJ9 461 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 CLEC4DQ8WXI8 215 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 KATNBL1Q9H079 304 aa18.87■□□□□ 0.61
NDE1-205ENST00000572756 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.87■□□□□ 0.61
NDE1-205ENST00000572756 COL9A3Q14050 684 aaPredicted RBP18.86■□□□□ 0.61
NDE1-205ENST00000572756 ARMCX2Q7L311 632 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 CHST3Q7LGC8 479 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 ADGRF4Q8IZF3 695 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 STAG2Q8N3U4 1231 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 IGDCC4Q8TDY8 1250 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 MAD2L2Q9UI95 211 aa18.86■□□□□ 0.61
NDE1-205ENST00000572756 BAZ2BQ9UIF8 2168 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms