RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 ALYREFQ86V81 257 aaKnown RBP12.24□□□□□ -0.45
CHMP6-203ENST00000572525 FAM9BQ8IZU0 186 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 VWCEQ96DN2 955 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 SNX27Q96L92 541 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 KATNBL1Q9H079 304 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 FBXO28Q9NVF7 368 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 FBXO40Q9UH90 709 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 SPTBN4Q9H254 2564 aa12.24□□□□□ -0.45
CHMP6-203ENST00000572525 UMODL1Q5DID0 1318 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 AKR1B1P15121 316 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 RABGGTBP53611 331 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 SNRNP48Q6IEG0 339 aaKnown RBP12.23□□□□□ -0.45
CHMP6-203ENST00000572525 ARMCX2Q7L311 632 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 KHSRPQ92945 711 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHMP6-203ENST00000572525 FGD4Q96M96 766 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 AGBL1Q96MI9 1066 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 ATP8A2Q9NTI2 1148 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 Q9Y3F1 56 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 USP34Q70CQ2 3546 aa12.23□□□□□ -0.45
CHMP6-203ENST00000572525 ZEB2O60315 1214 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 CA3P07451 260 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 ACTN1P12814 892 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 MYOGP15173 224 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 RFC2P35250 354 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 MRE11P49959 708 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 RARSP54136 660 aaKnown RBP12.22□□□□□ -0.45
CHMP6-203ENST00000572525 OAZ1P54368 228 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 OS9Q13438 667 aaPredicted RBP12.22□□□□□ -0.45
CHMP6-203ENST00000572525 PRPF38AQ8NAV1 312 aaKnown RBP12.22□□□□□ -0.45
CHMP6-203ENST00000572525 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 SLF1Q9BQI6 1058 aa12.22□□□□□ -0.45
CHMP6-203ENST00000572525 GNEQ9Y223 722 aaKnown RBP12.22□□□□□ -0.45
CHMP6-203ENST00000572525 ASTN1O14525 1302 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 GRIN2DO15399 1336 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 IPO8O15397 1037 aaKnown RBP12.21□□□□□ -0.45
CHMP6-203ENST00000572525 B4GALT4O60513 344 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 FDX1P10109 184 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 EEF2P13639 858 aaKnown RBP12.21□□□□□ -0.45
CHMP6-203ENST00000572525 ALADP13716 330 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 CCL23P55773 120 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 IRX5P78411 483 aaPredicted RBP12.21□□□□□ -0.45
CHMP6-203ENST00000572525 TAP1Q03518 808 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 C16orf86Q6ZW13 317 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 CLEC10AQ8IUN9 316 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 EAF2Q96CJ1 260 aaPredicted RBP12.21□□□□□ -0.45
CHMP6-203ENST00000572525 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 TLR7Q9NYK1 1049 aaKnown RBP12.21□□□□□ -0.45
CHMP6-203ENST00000572525 SYNPO2Q9UMS6 1093 aa12.21□□□□□ -0.45
CHMP6-203ENST00000572525 C5orf42Q9H799 3197 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 CACNA1HO95180 2353 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 ZBBXA8MT70 800 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 KIF28PB7ZC32 967 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 SURF6O75683 361 aaKnown RBP12.2□□□□□ -0.46
CHMP6-203ENST00000572525 PDE6AP16499 860 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 CDK8P49336 464 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 ATP8B2P98198 1209 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 EVX2Q03828 476 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
CHMP6-203ENST00000572525 FAM83BQ5T0W9 1011 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 C12orf60Q5U649 245 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 FAM178BQ8IXR5 827 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 AMOTL1Q8IY63 956 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHMP6-203ENST00000572525 RIPK3Q9Y572 518 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
CHMP6-203ENST00000572525 NLRC5Q86WI3 1866 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 TNKSO95271 1327 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 FAM86C2PA6NEL3 165 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 EPOPA6NHQ4 379 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 ASB14A6NK59 587 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 LPXNO60711 386 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 BAIAP3O94812 1187 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 TRIM27P14373 513 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 NHLH1Q02575 133 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 GRB10Q13322 594 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 TTLL4Q14679 1199 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 SLC9C2Q5TAH2 1124 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 SAMD1Q6SPF0 538 aaPredicted RBP12.19□□□□□ -0.46
CHMP6-203ENST00000572525 TLK2Q86UE8 772 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 ANKRD35Q8N283 1001 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 DYNLL2Q96FJ2 89 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 CCDC8Q9H0W5 538 aaPredicted RBP12.19□□□□□ -0.46
CHMP6-203ENST00000572525 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
CHMP6-203ENST00000572525 SLC38A10Q9HBR0 1119 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 NYAP2Q9P242 653 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 CACNA1AO00555 2505 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
CHMP6-203ENST00000572525 ZBED9Q6R2W3 1325 aa12.18□□□□□ -0.46
CHMP6-203ENST00000572525 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms