RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 BRWD1Q9NSI6 2320 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 CTAGE5O15320 804 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 RAD21O60216 631 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 GNAI3P08754 354 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 NKX3-2P78367 333 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 PUS10Q3MIT2 529 aaKnown RBP15.82■□□□□ 0.12
CCDC40-208ENST00000572270 ALDH1L2Q3SY69 923 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 ARMCX2Q7L311 632 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 CLEC10AQ8IUN9 316 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.82■□□□□ 0.12
CCDC40-208ENST00000572270 VWCEQ96DN2 955 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 MCM9Q9NXL9 1143 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 SCN5AQ14524 2016 aa15.82■□□□□ 0.12
CCDC40-208ENST00000572270 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.81■□□□□ 0.12
CCDC40-208ENST00000572270 SUPT20HL2P0C7V6 817 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 TNFAIP2Q03169 654 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 FSCN1Q16658 493 aaKnown RBP15.81■□□□□ 0.12
CCDC40-208ENST00000572270 TLK2Q86UE8 772 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 REPS2Q8NFH8 660 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 PHOX2BQ99453 314 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 DBNDD2Q9BQY9 259 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 AP5M1Q9H0R1 490 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 GOPCQ9HD26 462 aa15.81■□□□□ 0.12
CCDC40-208ENST00000572270 GRIN2DO15399 1336 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 RFC2P35250 354 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 SLC4A3P48751 1232 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 TNNI3KQ59H18 835 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 TMED8Q6PL24 325 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-208ENST00000572270 HFE2Q6ZVN8 426 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 ANKRD35Q8N283 1001 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 ZNF512BQ96KM6 892 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-208ENST00000572270 API5Q9BZZ5 524 aaKnown RBP15.8■□□□□ 0.12
CCDC40-208ENST00000572270 FTOQ9C0B1 505 aaKnown RBP eCLIP15.8■□□□□ 0.12
CCDC40-208ENST00000572270 CTDP1Q9Y5B0 961 aaPredicted RBP15.8■□□□□ 0.12
CCDC40-208ENST00000572270 FPGT-TNNI3KV9GXZ4 949 aa15.8■□□□□ 0.12
CCDC40-208ENST00000572270 CACNA1AO00555 2505 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 CFAP54Q96N23 3096 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 ZNF318Q5VUA4 2279 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 GRXCR2A6NFK2 248 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 AKR1B1P15121 316 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 KCNJ6P48051 423 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 PTPN5P54829 565 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 PSMC6P62333 389 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 SIAH1Q8IUQ4 282 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 CCDC144CPQ8IYA2 1237 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 CRNKL1Q9BZJ0 848 aaKnown RBP15.79■□□□□ 0.12
CCDC40-208ENST00000572270 ALDH8A1Q9H2A2 487 aaPredicted RBP15.79■□□□□ 0.12
CCDC40-208ENST00000572270 GPR108Q9NPR9 543 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 FAM50BQ9Y247 325 aa15.79■□□□□ 0.12
CCDC40-208ENST00000572270 TANC1Q9C0D5 1861 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 ASTN1O14525 1302 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 MAGEB6P1A0A0J9YX57 407 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.78■□□□□ 0.12
CCDC40-208ENST00000572270 CYP2C9P11712 490 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 FAM83BQ5T0W9 1011 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 SLF1Q9BQI6 1058 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 UPF3BQ9BZI7 483 aaKnown RBP15.78■□□□□ 0.12
CCDC40-208ENST00000572270 RIPK3Q9Y572 518 aa15.78■□□□□ 0.12
CCDC40-208ENST00000572270 TNKSO95271 1327 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 DYNC1LI2O43237 492 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 BAIAP3O94812 1187 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 EVX2Q03828 476 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 OS9Q13438 667 aaPredicted RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 CCDC17Q96LX7 622 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 RIOK1Q9BRS2 568 aaKnown RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 TRMT13Q9NUP7 481 aaKnown RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 FBXO40Q9UH90 709 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.12
CCDC40-208ENST00000572270 NOB1Q9ULX3 412 aaKnown RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 GNEQ9Y223 722 aaKnown RBP15.77■□□□□ 0.12
CCDC40-208ENST00000572270 SIP14410 1827 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 CPXCR1Q8N123 301 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 FGD4Q96M96 766 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 PRRX2Q99811 253 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 KATNBL1Q9H079 304 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 PRKAG3Q9UGI9 489 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 PTPRSQ13332 1948 aa15.76■□□□□ 0.11
CCDC40-208ENST00000572270 LCHNA4D1U4 455 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 GFRA3O60609 400 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 ZBED4O75132 1171 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.75■□□□□ 0.11
CCDC40-208ENST00000572270 PRSS33Q8NF86 280 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 ANKS1AQ92625 1134 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 TGS1Q96RS0 853 aaKnown RBP15.75■□□□□ 0.11
CCDC40-208ENST00000572270 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 SUGCTQ9HAC7 445 aa15.75■□□□□ 0.11
CCDC40-208ENST00000572270 E9PSI1 815 aa15.74■□□□□ 0.11
CCDC40-208ENST00000572270 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
CCDC40-208ENST00000572270 CYP2D6P10635 497 aa15.74■□□□□ 0.11
CCDC40-208ENST00000572270 ZP2Q05996 745 aa15.74■□□□□ 0.11
CCDC40-208ENST00000572270 PRPF38AQ8NAV1 312 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms