RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 TICAM2Q86XR7 235 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 ANKRD35Q8N283 1001 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 KLHDC9Q8NEP7 349 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 CHURC1Q8WUH1 139 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 FAM227BQ96M60 508 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 TSEN34Q9BSV6 310 aaKnown RBP15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
ATP2A3-211ENST00000572176 MOXD2PA6NHM9 499 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 ADCY6O43306 1168 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 DUSP11O75319 330 aaKnown RBP15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 MCCP23508 829 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 CST5P28325 142 aaPredicted RBP15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 ACVR2BQ13705 512 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 CCSAPQ6IQ19 270 aaPredicted RBP15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 KCTD1Q719H9 257 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 ARMCX2Q7L311 632 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 FAM133AQ8N9E0 248 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 BADQ92934 168 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 KATNBL1Q9H079 304 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 ABHD16BQ9H3Z7 469 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 A1CFQ9NQ94 594 aaKnown RBP15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 HOMER2Q9NSB8 354 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 MTMR10Q9NXD2 777 aa15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 ISY1Q9ULR0 285 aaKnown RBP15.24■□□□□ 0.03
ATP2A3-211ENST00000572176 MYADML2A6NDP7 307 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 CLTBP09497 229 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 ACLYP53396 1101 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 IKQ13123 557 aaPredicted RBP15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 AAMPQ13685 434 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 TKFCQ3LXA3 575 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 FAM109BQ6ICB4 259 aaPredicted RBP15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 ZNF589Q86UQ0 364 aaPredicted RBP15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 CCDC144CPQ8IYA2 1237 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 AGBL1Q96MI9 1066 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 UPF3AQ9H1J1 476 aaKnown RBP15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 LCTP09848 1927 aa15.23■□□□□ 0.03
ATP2A3-211ENST00000572176 POTEB2H3BUK9 544 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 KIAA0355O15063 1070 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 FGAP02671 866 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 ITGB8P26012 769 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 CNTN2Q02246 1040 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 NMIQ13287 307 aaPredicted RBP15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 SHHQ15465 462 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 CCDC144BQ3MJ40 725 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 ANKRD33Q7Z3H0 272 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 DCAF4Q8WV16 495 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 CHMP4CQ96CF2 233 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 LNPKQ9C0E8 428 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 STARD7Q9NQZ5 370 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 STXBP5LQ9Y2K9 1186 aa15.22■□□□□ 0.03
ATP2A3-211ENST00000572176 ASTN1O14525 1302 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 PQBP1O60828 265 aaKnown RBP15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 HSPD1P10809 573 aaKnown RBP15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 GJA9P57773 515 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 KCNA10Q16322 511 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 NUP133Q8WUM0 1156 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 TOX2Q96NM4 488 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 TCP11L1Q9NUJ3 509 aa15.21■□□□□ 0.03
ATP2A3-211ENST00000572176 LAMA4Q16363 1823 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 SOWAHBA6NEL2 793 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 C6orf222P0C671 652 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 ALAS1P13196 640 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 SNAP25P60880 206 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 NKX3-2P78367 333 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 IRX5P78411 483 aaPredicted RBP15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 PCSK9Q8NBP7 692 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 RANBP17Q9H2T7 1088 aaKnown RBP15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 TOMM22Q9NS69 142 aa15.2■□□□□ 0.02
ATP2A3-211ENST00000572176 ELP1O95163 1332 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 ASB14A6NK59 587 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 CTAGE5O15320 804 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 ICAM1P05362 532 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 TOP1P11387 765 aaKnown RBP15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 FAAP100Q0VG06 881 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 RRP12Q5JTH9 1297 aaKnown RBP15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 SLC17A8Q8NDX2 589 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 GLT1D1Q96MS3 346 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 GUCD1Q96NT3 240 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 TMEM47Q9BQJ4 181 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 OSBPL3Q9H4L5 887 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 SPC25Q9HBM1 224 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 CCPG1Q9ULG6 757 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 MTMR7Q9Y216 660 aa15.19■□□□□ 0.02
ATP2A3-211ENST00000572176 MROH7Q68CQ1 1323 aa15.18■□□□□ 0.02
ATP2A3-211ENST00000572176 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms