RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NUP133Q8WUM0 1156 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 LSG1Q9H089 658 aaKnown RBP15.7■□□□□ 0.1
CCDC40-205ENST00000571028 PRDM12Q9H4Q4 367 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 ZNF287Q9HBT7 754 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 STARD7Q9NQZ5 370 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 RBM8AQ9Y5S9 174 aaKnown RBP15.7■□□□□ 0.1
CCDC40-205ENST00000571028 ZNF236Q9UL36 1845 aa15.7■□□□□ 0.1
CCDC40-205ENST00000571028 RANBP6O60518 1105 aaKnown RBP15.69■□□□□ 0.1
CCDC40-205ENST00000571028 FLOT1O75955 427 aa15.69■□□□□ 0.1
CCDC40-205ENST00000571028 RASA1P20936 1047 aa15.69■□□□□ 0.1
CCDC40-205ENST00000571028 PPIGQ13427 754 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC40-205ENST00000571028 CCDC85BQ15834 202 aaPredicted RBP15.69■□□□□ 0.1
CCDC40-205ENST00000571028 CLEC10AQ8IUN9 316 aa15.69■□□□□ 0.1
CCDC40-205ENST00000571028 ROBO3Q96MS0 1386 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 TIMP1P01033 207 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 AKR1A1P14550 325 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 TFAP4Q01664 338 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 FAAP100Q0VG06 881 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 MFSD6Q6ZSS7 791 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 ANKRD33Q7Z3H0 272 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 MAP4K1Q92918 833 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 CCDC17Q96LX7 622 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 TOX2Q96NM4 488 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 MMP19Q99542 508 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC40-205ENST00000571028 C1QTNF1Q9BXJ1 281 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 MSRAQ9UJ68 235 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 CNPY2Q9Y2B0 182 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 ZMYM6O95789 1325 aa15.68■□□□□ 0.1
CCDC40-205ENST00000571028 TSPY2A6NKD2 308 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 GUCY1A2P33402 732 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 KCTD2Q14681 263 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 TMEM179Q6ZVK1 233 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 TINF2Q9BSI4 451 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 PBX4Q9BYU1 374 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC40-205ENST00000571028 MROH7Q68CQ1 1323 aa15.67■□□□□ 0.1
CCDC40-205ENST00000571028 RAD21O60216 631 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 SLC25A27O95847 323 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 CYP21A2P08686 494 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 DSG3P32926 999 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 PBX2P40425 430 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 ACLYP53396 1101 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 RAB30Q15771 203 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 MFSD5Q6N075 450 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 PSRC1Q6PGN9 363 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-205ENST00000571028 TMEM199Q8N511 208 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 STAG1Q8WVM7 1258 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 VTI1AQ96AJ9 217 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 TSEN34Q9BSV6 310 aaKnown RBP15.66■□□□□ 0.1
CCDC40-205ENST00000571028 MTIF3Q9H2K0 278 aaKnown RBP15.66■□□□□ 0.1
CCDC40-205ENST00000571028 RNF41Q9H4P4 317 aaPredicted RBP15.66■□□□□ 0.1
CCDC40-205ENST00000571028 SH2D4AQ9H788 454 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 HCN4Q9Y3Q4 1203 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 NEDD4P46934 1319 aa15.66■□□□□ 0.1
CCDC40-205ENST00000571028 MOXD2PA6NHM9 499 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 GRXCR1A8MXD5 290 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 REC8O95072 547 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 PGK2P07205 417 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 ICA1Q05084 483 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 LENG1Q96BZ8 264 aaPredicted RBP15.65■□□□□ 0.1
CCDC40-205ENST00000571028 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 GLT1D1Q96MS3 346 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 ARHGEF10LQ9HCE6 1279 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 TAF6LQ9Y6J9 622 aa15.65■□□□□ 0.1
CCDC40-205ENST00000571028 A0A1W2PRG0 241 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 B4E1Z4 1266 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 SLC27A2O14975 620 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 KDM4AO75164 1064 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 SPICE1Q8N0Z3 855 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 ZKSCAN3Q9BRR0 538 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 SLC28A3Q9HAS3 691 aa15.64■□□□□ 0.09
CCDC40-205ENST00000571028 ORC4O43929 436 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 NMT2O60551 498 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 EEF2P13639 858 aaKnown RBP15.63■□□□□ 0.09
CCDC40-205ENST00000571028 CSF2RAP15509 400 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 TAL1P17542 331 aaPredicted RBP15.63■□□□□ 0.09
CCDC40-205ENST00000571028 TRDNQ13061 729 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 SKIV2LQ15477 1246 aaKnown RBP15.63■□□□□ 0.09
CCDC40-205ENST00000571028 AAK1Q2M2I8 961 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 TMEM240Q5SV17 173 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 NEDD1Q8NHV4 660 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 ESR2Q92731 530 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC40-205ENST00000571028 KANSL2Q9H9L4 492 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 SPC25Q9HBM1 224 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 CLIP2Q9UDT6 1046 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 TBX21Q9UL17 535 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 FAM184BQ9ULE4 1060 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 DIS3Q9Y2L1 958 aaKnown RBP15.63■□□□□ 0.09
CCDC40-205ENST00000571028 SYNRGQ9UMZ2 1314 aa15.63■□□□□ 0.09
CCDC40-205ENST00000571028 E7EWF7 191 aa15.62■□□□□ 0.09
CCDC40-205ENST00000571028 TLR3O15455 904 aaKnown RBP15.62■□□□□ 0.09
CCDC40-205ENST00000571028 ADAMTS4O75173 837 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms