RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PLXNA1Q9UIW2 1896 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 SLC15A5A6NIM6 579 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 GOLIM4O00461 696 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 HMMRO75330 724 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 CNMDO75829 334 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 CNGA1P29973 690 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 SOX11P35716 441 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 PLCD1P51178 756 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 ATP2B2Q01814 1243 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 GRB14Q14449 540 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 SEPT2Q15019 361 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 SLC9C2Q5TAH2 1124 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 PNMA1Q8ND90 353 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 SDR42E1Q8WUS8 393 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 USP6NLQ92738 828 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 KIF1BPQ96EK5 621 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 EDC3Q96F86 508 aaKnown RBP7.84□□□□□ -1.15
SMG6-204ENST00000570606 GDF15Q99988 308 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 RIOK1Q9BRS2 568 aaKnown RBP7.84□□□□□ -1.15
SMG6-204ENST00000570606 UBE2OQ9C0C9 1292 aaKnown RBP7.84□□□□□ -1.15
SMG6-204ENST00000570606 PRDM9Q9NQV7 894 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 FKBPLQ9UIM3 349 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 DNAH12Q6ZR08 3092 aa7.84□□□□□ -1.15
SMG6-204ENST00000570606 COL6A3P12111 3177 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 ZNF532Q9HCE3 1301 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 LTBP2Q14767 1821 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 TLL1O43897 1013 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 MSCO60682 206 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 FBXO45P0C2W1 286 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 CCNYL3P0C7X3 344 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 BMP8BP34820 402 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 ICA1Q05084 483 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 GABPAQ06546 454 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 LRRC26Q2I0M4 334 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 LBX2Q6XYB7 198 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 AMOTL1Q8IY63 956 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 TDHQ8IZJ6 230 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 LCORLQ8N3X6 602 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 UCN2Q96RP3 112 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 SH2D4AQ9H788 454 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 ARHGEF10LQ9HCE6 1279 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 FLRT1Q9NZU1 646 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 BTBD7Q9P203 1132 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 SWAP70Q9UH65 585 aa7.83□□□□□ -1.16
SMG6-204ENST00000570606 DDX20Q9UHI6 824 aaKnown RBP7.83□□□□□ -1.16
SMG6-204ENST00000570606 MYH4Q9Y623 1939 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 FLOT1O75955 427 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 MBD4O95243 580 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 CYP2D6P10635 497 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 COL6A1P12109 1028 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 ADORA2AP29274 412 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 CYP2C19P33261 490 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 GUCY1A2P33402 732 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 NR1H3Q13133 447 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 PLS1Q14651 629 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 TMEM179Q6ZVK1 233 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 DPP9Q86TI2 863 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 DEFB123Q8N688 67 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 MB21D1Q8N884 522 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 SLC44A5Q8NCS7 719 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 SLC17A8Q8NDX2 589 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 NPLOC4Q8TAT6 608 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMG6-204ENST00000570606 MTRQ99707 1265 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 PPP1R12CQ9BZL4 782 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMG6-204ENST00000570606 ARMT1Q9H993 441 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 DCP1AQ9NPI6 582 aaPredicted RBP7.82□□□□□ -1.16
SMG6-204ENST00000570606 EVA1BQ9NVM1 165 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 PAG1Q9NWQ8 432 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 DDX19BQ9UMR2 479 aa7.82□□□□□ -1.16
SMG6-204ENST00000570606 SMCHD1A6NHR9 2005 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 A0A1W2PRG0 241 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 TCRBV5S4A2TA0A5A2 114 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 ZBBXA8MT70 800 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 KBTBD13C9JR72 458 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 RAB11FIP3O75154 756 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 ADH1BP00325 375 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 HOXC6P09630 235 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 ERCC3P19447 782 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 COG2Q14746 738 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 LRIT3Q3SXY7 679 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 Q7L0L9 218 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 CLEC10AQ8IUN9 316 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 RPAP2Q8IXW5 612 aaPredicted RBP7.81□□□□□ -1.16
SMG6-204ENST00000570606 SPICE1Q8N0Z3 855 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 LPAR1Q92633 364 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 DYNLL2Q96FJ2 89 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 LBHD1Q9BQE6 289 aaPredicted RBP7.81□□□□□ -1.16
SMG6-204ENST00000570606 MOV10L1Q9BXT6 1211 aaKnown RBP7.81□□□□□ -1.16
SMG6-204ENST00000570606 SENP6Q9GZR1 1112 aaPredicted RBP7.81□□□□□ -1.16
SMG6-204ENST00000570606 SPATC1LQ9H0A9 340 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 BOLA2Q9H3K6 86 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 SLC5A4Q9NY91 659 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 HOXC10Q9NYD6 342 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 PRKAG2Q9UGJ0 569 aa7.81□□□□□ -1.16
SMG6-204ENST00000570606 GREB1LQ9C091 1923 aaPredicted RBP7.8□□□□□ -1.16
SMG6-204ENST00000570606 DNM1LO00429 736 aa7.8□□□□□ -1.16
SMG6-204ENST00000570606 WDR46O15213 610 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms