RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 SEC23AQ15436 765 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 IFIT1BQ5T764 474 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 OLFML2BQ68BL8 750 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 U2AF1L4Q8WU68 220 aaKnown RBP16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 ZNF536O15090 1300 aa16.19■□□□□ 0.18
HERPUD1-218ENST00000569569 MCM3APO60318 1980 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 ERICH2A1L162 156 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 SLC27A2O14975 620 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 TKFCQ3LXA3 575 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 SYDE2Q5VT97 1194 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 CREB3L3Q68CJ9 461 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 DDX11Q96FC9 970 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 AGBL1Q96MI9 1066 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 DEFB118Q96PH6 123 aa16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 DIS3Q9Y2L1 958 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 BAZ2BQ9UIF8 2168 aaKnown RBP16.18■□□□□ 0.18
HERPUD1-218ENST00000569569 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 IGHA2P01877 340 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 TFRCP02786 760 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 PGK2P07205 417 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 SNAP25P60880 206 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 RNF20Q5VTR2 975 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 SHISA4Q96DD7 197 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 MAML3Q96JK9 1138 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
HERPUD1-218ENST00000569569 ICAM1P05362 532 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 PARP1P09874 1014 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 GOLGA8HP0CJ92 632 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 CYP2C19P33261 490 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 WTAPQ15007 396 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 ASPRV1Q53RT3 343 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 CHST3Q7LGC8 479 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 MB21D2Q8IYB1 491 aaPredicted RBP16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 TRERF1Q96PN7 1200 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 CRISPLD2Q9H0B8 497 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
HERPUD1-218ENST00000569569 DNAJC25-GNG10A0A024R161 153 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 ALAS1P13196 640 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 CCND3P30281 292 aaPredicted RBP16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 IGDCC4Q8TDY8 1250 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 HOMER2Q9NSB8 354 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 RNF146Q9NTX7 359 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
HERPUD1-218ENST00000569569 MCM5P33992 734 aa16.14■□□□□ 0.17
HERPUD1-218ENST00000569569 ANTXR2P58335 489 aa16.14■□□□□ 0.17
HERPUD1-218ENST00000569569 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
HERPUD1-218ENST00000569569 TINF2Q9BSI4 451 aa16.14■□□□□ 0.17
HERPUD1-218ENST00000569569 CYBAP13498 195 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 CNGA1P29973 690 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 TSGA10IPQ3SY00 556 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 CPVLQ9H3G5 476 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 OGDHLQ9ULD0 1010 aa16.13■□□□□ 0.17
HERPUD1-218ENST00000569569 LCTP09848 1927 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 PRC1O43663 620 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 MSCO60682 206 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 LHX8Q68G74 356 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 MAMDC4Q6UXC1 1216 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 ZNF467Q7Z7K2 595 aaPredicted RBP16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 ADGRF4Q8IZF3 695 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 STAG2Q8N3U4 1231 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 TMEM87BQ96K49 555 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 SENP2Q9HC62 589 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 A1CFQ9NQ94 594 aaKnown RBP16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 MAD2L2Q9UI95 211 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 PFASO15067 1338 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 WDR19Q8NEZ3 1342 aa16.12■□□□□ 0.17
HERPUD1-218ENST00000569569 PALM3A6NDB9 673 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 KLRF2D3W0D1 207 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 POTEB2H3BUK9 544 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 FARP2O94887 1054 aaPredicted RBP16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 REC8O95072 547 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 TROAPQ12815 778 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 GRM4Q14833 912 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 UBE2Q1Q7Z7E8 422 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 LY9Q9HBG7 655 aa16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 DDX20Q9UHI6 824 aaKnown RBP16.11■□□□□ 0.17
HERPUD1-218ENST00000569569 SYNGAP1Q96PV0 1343 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 166.4 ms