RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 DIS3Q9Y2L1 958 aaKnown RBP13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 BOLA1Q9Y3E2 137 aa13.4□□□□□ -0.26
CHRFAM7A-206ENST00000569278 PQBP1O60828 265 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 IFIT2P09913 472 aaKnown RBP13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RARBP10826 455 aa13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ANKRD33Q7Z3H0 272 aa13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SH2D4AQ9H788 454 aa13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TBX21Q9UL17 535 aa13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 COG6Q9Y2V7 657 aa13.39□□□□□ -0.27
CHRFAM7A-206ENST00000569278 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 CTAGE5O15320 804 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 NDUFB10O96000 172 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 AKR1A1P14550 325 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 STAT3P40763 770 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 KATNBL1Q9H079 304 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SLC5A4Q9NY91 659 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TRANK1O15050 2925 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SMARCA5O60264 1052 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ACLYP53396 1101 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 MAMDC4Q6UXC1 1216 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 OSBP2Q969R2 916 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 STRBPQ96SI9 672 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TACC3Q9Y6A5 838 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ASTN1O14525 1302 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
CHRFAM7A-206ENST00000569278 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 FOSL2P15408 326 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 PTGS1P23219 599 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 CST5P28325 142 aaPredicted RBP13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 KCTD2Q14681 263 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SBK1Q52WX2 424 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TSHZ3Q63HK5 1081 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RNF180Q86T96 592 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SLF1Q9BQI6 1058 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ARPP21Q9UBL0 812 aaPredicted RBP13.36□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TMEM265A0A087WTH1 108 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 F5H6K3 240 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ATP2A1O14983 1001 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 DNAJB2P25686 324 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 CDK7P50613 346 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 FPGSQ05932 587 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 KLRC3Q07444 240 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 STK11IPQ8N1F8 1099 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 UPF3AQ9H1J1 476 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 PRDM6Q9NQX0 595 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 DDX49Q9Y6V7 483 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-206ENST00000569278 M0R2C6 588 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 EIF5BO60841 1220 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 PBX2P40425 430 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 KCNA10Q16322 511 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 RASGRP2Q7LDG7 609 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 MSL3Q8N5Y2 521 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 VWCEQ96DN2 955 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 STARD7Q9NQZ5 370 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 TMEM39AQ9NV64 488 aa13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 ZHX1Q9UKY1 873 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-206ENST00000569278 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GRXCR1A8MXD5 290 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 FOXP2O15409 715 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 DUSP11O75319 330 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 HMMRO75330 724 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 PRDM1O75626 825 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 TIMP1P01033 207 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 RAG1P15918 1043 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 COPB2P35606 906 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 NKX3-2P78367 333 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CEP95Q96GE4 821 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 RAVER2Q9HCJ3 691 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 CNPY2Q9Y2B0 182 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ZNF536O15090 1300 aa13.33□□□□□ -0.28
CHRFAM7A-206ENST00000569278 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 RAD21O60216 631 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ASGR1P07306 291 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 GJA9P57773 515 aa13.32□□□□□ -0.28
CHRFAM7A-206ENST00000569278 ACVR2BQ13705 512 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms