RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 LDHBP07195 334 aaKnown RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 FGFR2P21802 821 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 IRX3P78415 501 aaPredicted RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 PUM3Q15397 648 aaKnown RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 CCL14Q16627 93 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 LYSMD3Q7Z3D4 306 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 PRICKLE2Q7Z3G6 844 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 GPRC5AQ8NFJ5 357 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 LPAR1Q92633 364 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 BADQ92934 168 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 ZNF775Q96BV0 537 aaPredicted RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 XAGE2Q96GT9 111 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 KAZALD1Q96I82 304 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 SUCLG2Q96I99 432 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 ASB2Q96Q27 587 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 UHRF1Q96T88 793 aaPredicted RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 C1QTNF1Q9BXJ1 281 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 OSBPL5Q9H0X9 879 aaPredicted RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 THEGQ9P2T0 379 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 DDX20Q9UHI6 824 aaKnown RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 ATP11BQ9Y2G3 1177 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 GAKO14976 1311 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 SALL1Q9NSC2 1324 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 HOXA7P31268 230 aaPredicted RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 ATP1A2P50993 1020 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 HERVK_113P62684 666 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 CENPCQ03188 943 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 SNX17Q15036 470 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 RABL6Q3YEC7 729 aaPredicted RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 MFSD14CQ5VZR4 134 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 GPR142Q7Z601 462 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 PLEKHH3Q7Z736 793 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 RNPC3Q96LT9 517 aaKnown RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 AS3MTQ9HBK9 375 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 TXNRD2Q9NNW7 524 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 DDX4Q9NQI0 724 aaKnown RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 PRDM5Q9NQX1 630 aaPredicted RBP7.33□□□□□ -1.24
CDH13-212ENST00000569144 PDLIM7Q9NR12 457 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 HRH3Q9Y5N1 445 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 AK9Q5TCS8 1911 aa7.33□□□□□ -1.24
CDH13-212ENST00000569144 UTYO14607 1347 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 TMEM229AB2RXF0 380 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 PEX10O60683 326 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 SLC5A1P13866 664 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 RFX1P22670 979 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 ERVK-24P63145 666 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 CLDN10P78369 228 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 MRPS5P82675 430 aaKnown RBP7.32□□□□□ -1.24
CDH13-212ENST00000569144 PICALMQ13492 652 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 TLR1Q15399 786 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 AKNAD1Q5T1N1 836 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 SLC39A5Q6ZMH5 540 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 CCAR1Q8IX12 1150 aaKnown RBP7.32□□□□□ -1.24
CDH13-212ENST00000569144 LPIN2Q92539 896 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 P2RX7Q99572 595 aaKnown RBP7.32□□□□□ -1.24
CDH13-212ENST00000569144 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 PORCNQ9H237 461 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 ZNF576Q9H609 170 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 BICC1Q9H694 974 aaKnown RBP7.32□□□□□ -1.24
CDH13-212ENST00000569144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.32□□□□□ -1.24
CDH13-212ENST00000569144 DNAAF2Q9NVR5 837 aaKnown RBP7.32□□□□□ -1.24
CDH13-212ENST00000569144 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 SERTAD1Q9UHV2 236 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 KIAA1024Q9UPX6 916 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 DNAH12Q6ZR08 3092 aa7.32□□□□□ -1.24
CDH13-212ENST00000569144 FRMPD3Q5JV73 1810 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 FAM196BA6NMK8 535 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 KBTBD13C9JR72 458 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 VAMP4O75379 141 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 NBPF7P0C2Y1 421 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 RHOQP17081 205 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 CNGA1P29973 690 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 CAP2P40123 477 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 BACE1P56817 501 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 PTSQ03393 145 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 ZGPATQ8N5A5 531 aaKnown RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 ANKRD44Q8N8A2 993 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 ARRDC4Q8NCT1 418 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 TRIM43Q96BQ3 446 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 EDC3Q96F86 508 aaKnown RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 ZSCAN10Q96SZ4 725 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 GAS2L1Q99501 681 aaPredicted RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 WDR18Q9BV38 432 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 SRCIN1Q9C0H9 1055 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 GNL3LQ9NVN8 582 aaKnown RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 TMOD4Q9NZQ9 345 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 NXF1Q9UBU9 619 aaKnown RBP7.31□□□□□ -1.24
CDH13-212ENST00000569144 DENND2AQ9ULE3 1009 aa7.31□□□□□ -1.24
CDH13-212ENST00000569144 IL16Q14005 1332 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms