RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 KRT24Q2M2I5 525 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 CCDC84Q86UT8 332 aaPredicted RBP10.12□□□□□ -0.79
CDH11-216ENST00000569128 FBXO27Q8NI29 283 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 SLC52A2Q9HAB3 445 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 IFT57Q9NWB7 429 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 NOP53Q9NZM5 478 aaKnown RBP10.12□□□□□ -0.79
CDH11-216ENST00000569128 TOGARAM1Q9Y4F4 1720 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 ADAMTS7Q9UKP4 1686 aa10.12□□□□□ -0.79
CDH11-216ENST00000569128 TLR3O15455 904 aaKnown RBP10.11□□□□□ -0.79
CDH11-216ENST00000569128 KCNQ2O43526 872 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 ELNP15502 786 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 LIG1P18858 919 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 CRKP46108 304 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 GNAI1P63096 354 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 CALD1Q05682 793 aaKnown RBP10.11□□□□□ -0.79
CDH11-216ENST00000569128 EXOSC9Q06265 439 aaKnown RBP10.11□□□□□ -0.79
CDH11-216ENST00000569128 PRRT3Q5FWE3 981 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.11□□□□□ -0.79
CDH11-216ENST00000569128 FAM196AQ6ZSG2 479 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 PTF1AQ7RTS3 328 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 JAZF1Q86VZ6 243 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 GATAD2BQ8WXI9 593 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 WDR89Q96FK6 387 aaPredicted RBP10.11□□□□□ -0.79
CDH11-216ENST00000569128 KRT82Q9NSB4 513 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 CACNA2D2Q9NY47 1150 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 TSPYL4Q9UJ04 414 aa10.11□□□□□ -0.79
CDH11-216ENST00000569128 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 BTBD11A6QL63 1104 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 ERVV-2B6SEH9 535 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 ELL2O00472 640 aaPredicted RBP10.1□□□□□ -0.79
CDH11-216ENST00000569128 ZNF862O60290 1169 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 HSD3B2P26439 372 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 TCEAL1Q15170 157 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 GRIK4Q16099 956 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 TSPYL6Q8N831 410 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 C8orf58Q8NAV2 365 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 PIGBQ92521 554 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 GPATCH3Q96I76 525 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 NT5C1AQ9BXI3 368 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 MYH16Q9H6N6 1097 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 PCDHA4Q9UN74 947 aa10.1□□□□□ -0.79
CDH11-216ENST00000569128 FAM221AA4D161 298 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 CLSTN1O94985 981 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 CDK8P49336 464 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 APOBRQ0VD83 1088 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 PTPROQ16827 1216 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 SCARA3Q6AZY7 606 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 SHISA2Q6UWI4 295 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 ACAD11Q709F0 780 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 KRT27Q7Z3Y8 459 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 CKAP2LQ8IYA6 745 aa10.09□□□□□ -0.79
CDH11-216ENST00000569128 SYTL4Q96C24 671 aaPredicted RBP10.09□□□□□ -0.79
CDH11-216ENST00000569128 SIPA1L3O60292 1781 aaPredicted RBP10.09□□□□□ -0.79
CDH11-216ENST00000569128 RGS12O14924 1447 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 TCERG1O14776 1098 aaKnown RBP10.08□□□□□ -0.8
CDH11-216ENST00000569128 CENPBP07199 599 aaPredicted RBP10.08□□□□□ -0.8
CDH11-216ENST00000569128 EIF4A1P60842 406 aaKnown RBP10.08□□□□□ -0.8
CDH11-216ENST00000569128 HP1BP3Q5SSJ5 553 aaPredicted RBP10.08□□□□□ -0.8
CDH11-216ENST00000569128 IGF2-ASQ6U949 168 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 KIAA1211Q6ZU35 1233 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 MRFAP1L1Q96HT8 127 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 RUSC1Q9BVN2 902 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 TMOD3Q9NYL9 352 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 ASAP1Q9ULH1 1129 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 MRC1P22897 1456 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 KAT6BQ8WYB5 2073 aa10.08□□□□□ -0.8
CDH11-216ENST00000569128 DOT1LQ8TEK3 1739 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 ITGB4P16144 1822 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 PRAMEF22A3QJZ6 481 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 MARCH6O60337 910 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 CILPO75339 1184 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 COL8A1P27658 744 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 IGBP1P78318 339 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 SEZ6Q53EL9 994 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 EXOSC6Q5RKV6 272 aaKnown RBP10.07□□□□□ -0.8
CDH11-216ENST00000569128 ZNF790Q6PG37 636 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 RASGRP4Q8TDF6 673 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 MICAL1Q8TDZ2 1067 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 NKD1Q969G9 470 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
CDH11-216ENST00000569128 WDR18Q9BV38 432 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 BRINP2Q9C0B6 783 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
CDH11-216ENST00000569128 RAD18Q9NS91 495 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
CDH11-216ENST00000569128 hCG_2014768A0A024R1R8 64 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 RAB11FIP3O75154 756 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 VAMP4O75379 141 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 BPNT1O95861 308 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 SELPP16109 830 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 MPP2Q14168 576 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 ZNF496Q96IT1 587 aaPredicted RBP10.06□□□□□ -0.8
CDH11-216ENST00000569128 GINM1Q9NU53 330 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 BABAM1Q9NWV8 329 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 EFR3BQ9Y2G0 817 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 BCL9O00512 1426 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 KDM3BQ7LBC6 1761 aa10.06□□□□□ -0.8
CDH11-216ENST00000569128 K7ELQ4 463 aaPredicted RBP10.05□□□□□ -0.8
CDH11-216ENST00000569128 AOC2O75106 756 aa10.05□□□□□ -0.8
CDH11-216ENST00000569128 SPATA31C1P0DKV0 1188 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms