RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 FSCN1Q16658 493 aaKnown RBP10.44□□□□□ -0.74
SMG1-216ENST00000569122 SLC9C2Q5TAH2 1124 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 DBNLQ9UJU6 430 aaKnown RBP10.44□□□□□ -0.74
SMG1-216ENST00000569122 MUC6Q6W4X9 2439 aa10.44□□□□□ -0.74
SMG1-216ENST00000569122 MYO9BQ13459 2157 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 USP17L12C9JPN9 530 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 USP17L21D6R901 530 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 RFXAPO00287 272 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 B4GALT4O60513 344 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 BAIAP3O94812 1187 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
SMG1-216ENST00000569122 ATP8B2P98198 1209 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 NHLH1Q02575 133 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 TAP1Q03518 808 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 POLA2Q14181 598 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 FAM83BQ5T0W9 1011 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 IQSEC1Q6DN90 963 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 TLK2Q86UE8 772 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 CCDC144CPQ8IYA2 1237 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 RETREG2Q8NC44 543 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 CCDC8Q9H0W5 538 aaPredicted RBP10.43□□□□□ -0.74
SMG1-216ENST00000569122 TRPV6Q9H1D0 765 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 WNT8AQ9H1J5 351 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 CERS4Q9HA82 394 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 FAM50BQ9Y247 325 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 NOP58Q9Y2X3 529 aaKnown RBP10.43□□□□□ -0.74
SMG1-216ENST00000569122 CHD7Q9P2D1 2997 aa10.43□□□□□ -0.74
SMG1-216ENST00000569122 UMODL1Q5DID0 1318 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 CTAGE5O15320 804 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 DYNC1LI2O43237 492 aaPredicted RBP10.42□□□□□ -0.74
SMG1-216ENST00000569122 PDE6AP16499 860 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 CDK8P49336 464 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 BEX3Q00994 111 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 GRB10Q13322 594 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 TTLL4Q14679 1199 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 LEXMQ3ZCV2 418 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 BRDTQ58F21 947 aaPredicted RBP10.42□□□□□ -0.74
SMG1-216ENST00000569122 ERC1Q8IUD2 1116 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 HERC6Q8IVU3 1022 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 FAM178BQ8IXR5 827 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 CPXCR1Q8N123 301 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 AGBL1Q96MI9 1066 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 ALDH8A1Q9H2A2 487 aaPredicted RBP10.42□□□□□ -0.74
SMG1-216ENST00000569122 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
SMG1-216ENST00000569122 POLR3EQ9NVU0 708 aa10.42□□□□□ -0.74
SMG1-216ENST00000569122 GNEQ9Y223 722 aaKnown RBP10.42□□□□□ -0.74
SMG1-216ENST00000569122 ADCY6O43306 1168 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 KCNJ6P48051 423 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 RARSP54136 660 aaKnown RBP10.41□□□□□ -0.74
SMG1-216ENST00000569122 IRX5P78411 483 aaPredicted RBP10.41□□□□□ -0.74
SMG1-216ENST00000569122 C12orf60Q5U649 245 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 DEFB128Q7Z7B8 93 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 TRMT2AQ8IZ69 625 aaKnown RBP10.41□□□□□ -0.74
SMG1-216ENST00000569122 SDR42E1Q8WUS8 393 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 KHSRPQ92945 711 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMG1-216ENST00000569122 DYNLL2Q96FJ2 89 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 SCLYQ96I15 445 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 MFSD14AQ96MC6 490 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 UPF3BQ9BZI7 483 aaKnown RBP10.41□□□□□ -0.74
SMG1-216ENST00000569122 FTOQ9C0B1 505 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMG1-216ENST00000569122 ANTXR1Q9H6X2 564 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 UBE2ZQ9H832 354 aaPredicted RBP10.41□□□□□ -0.74
SMG1-216ENST00000569122 SLC38A10Q9HBR0 1119 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 CTNNA3Q9UI47 895 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 FEM1BQ9UK73 627 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
SMG1-216ENST00000569122 ZNF536O15090 1300 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 GRIN2DO15399 1336 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 ZNF532Q9HCE3 1301 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.4□□□□□ -0.74
SMG1-216ENST00000569122 F5H6K3 240 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 DCXO43602 365 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 PARNO95453 639 aaKnown RBP10.4□□□□□ -0.74
SMG1-216ENST00000569122 FOXK2Q01167 660 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 KLRC3Q07444 240 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 BFSP2Q13515 415 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 LRRFIP1Q32MZ4 808 aaKnown RBP10.4□□□□□ -0.74
SMG1-216ENST00000569122 TKFCQ3LXA3 575 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 CLEC10AQ8IUN9 316 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 EAF2Q96CJ1 260 aaPredicted RBP10.4□□□□□ -0.74
SMG1-216ENST00000569122 ZBED2Q9BTP6 218 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 KATNBL1Q9H079 304 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 ACAD9Q9H845 621 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 ZNF287Q9HBT7 754 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 NYAP2Q9P242 653 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 SYNPO2Q9UMS6 1093 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 COG6Q9Y2V7 657 aa10.4□□□□□ -0.74
SMG1-216ENST00000569122 PLXNA1Q9UIW2 1896 aa10.4□□□□□ -0.75
SMG1-216ENST00000569122 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.75
SMG1-216ENST00000569122 TNKSO95271 1327 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 A0A0G2JMZ2 1700 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 KPNA6O60684 536 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 CYP2D6P10635 497 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 CPT1AP50416 773 aa10.39□□□□□ -0.75
SMG1-216ENST00000569122 PKN1Q16512 942 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms