RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PNMA6AP0CW24 399 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 ATP2B1P20020 1258 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 TROAPQ12815 778 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 SEPT2Q15019 361 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 TMEM266Q2M3C6 531 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 RC3H1Q5TC82 1133 aaKnown RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 CNNM4Q6P4Q7 775 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 FOXR2Q6PJQ5 311 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 LEKR1Q6ZMV7 388 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 CCDC84Q86UT8 332 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 DZIP1Q86YF9 867 aaKnown RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 EXOC4Q96A65 974 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 CALML4Q96GE6 196 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 RIOK1Q9BRS2 568 aaKnown RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 MYL10Q9BUA6 226 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 CCSER1Q9C0I3 900 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 FAM107BQ9H098 131 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 HSD3B7Q9H2F3 369 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 SEC63Q9UGP8 760 aaKnown RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 LEMD3Q9Y2U8 911 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 ADGRG1Q9Y653 693 aa8.58□□□□□ -1.04
ATXN3-250ENST00000568290 COL22A1Q8NFW1 1626 aaPredicted RBP8.58□□□□□ -1.04
ATXN3-250ENST00000568290 SHANK3Q9BYB0 1731 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 DUOX1Q9NRD9 1551 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 KCNJ18B7U540 433 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 ONECUT3O60422 494 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 ZRANB2O95218 330 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 RPN1P04843 607 aaKnown RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 AFMP43652 599 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 USP5P45974 858 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 COPB1P53618 953 aaKnown RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 RPS8P62241 208 aaKnown RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 NR5A1Q13285 461 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 CUL4BQ13620 913 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 KCNJ12Q14500 433 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 SPA17Q15506 151 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 COBLL1Q53SF7 1204 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 TCP11X2Q5H9J9 407 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 FIGNQ5HY92 759 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 KLHL10Q6JEL2 608 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 RSRC2Q7L4I2 434 aaKnown RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 ZNF804AQ7Z570 1209 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 TMEM139Q8IV31 216 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 FOXP4Q8IVH2 680 aaPredicted RBP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 SETDB2Q96T68 719 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 EDEM3Q9BZQ6 932 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 VIPAS39Q9H9C1 493 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 VPS54Q9P1Q0 977 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 TSKSQ9UJT2 592 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
ATXN3-250ENST00000568290 NUP98P52948 1817 aa8.57□□□□□ -1.04
ATXN3-250ENST00000568290 CNTNAP4Q9C0A0 1308 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CHD4Q14839 1912 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 LAMB2P55268 1798 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 A0A1W2PQJ5 194 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 TARSL2A2RTX5 802 aaKnown RBP8.56□□□□□ -1.04
ATXN3-250ENST00000568290 FAM177BA6PVY3 158 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 USP17L12C9JPN9 530 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 USP17L21D6R901 530 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 GNPATO15228 680 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 NPHP1O15259 732 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PRKAB2O43741 272 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ZPR1O75312 459 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CLSTN1O94985 981 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PBX1P40424 430 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ADKP55263 362 aaKnown RBP8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PRSS12P56730 875 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CDK17Q00537 523 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 UBXN1Q04323 297 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 RBL2Q08999 1139 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PSMD2Q13200 908 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 SMC1AQ14683 1233 aaKnown RBP8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ZNF174Q15697 407 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PKN1Q16512 942 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ZNF569Q5MCW4 686 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CC2D1AQ6P1N0 951 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-250ENST00000568290 INTS5Q6P9B9 1019 aaKnown RBP8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CTR9Q6PD62 1173 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 FMNL3Q8IVF7 1028 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 TEX2Q8IWB9 1127 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 CCDC82Q8N4S0 544 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 NELFBQ8WX92 580 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 DPF2Q92785 391 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ALS2CR12Q96Q35 445 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 TSG101Q99816 390 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ZKSCAN3Q9BRR0 538 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 PRDM10Q9NQV6 1147 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 DISC1Q9NRI5 854 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 GJB4Q9NTQ9 266 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 EXOC1Q9NV70 894 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 RNF14Q9UBS8 474 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 STK17AQ9UEE5 414 aa8.56□□□□□ -1.04
ATXN3-250ENST00000568290 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms