RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 CCDC174Q6PII3 467 aa26.74■■□□□ 1.87
SPG7-217ENST00000568151 HOMER2Q9NSB8 354 aa26.74■■□□□ 1.87
SPG7-217ENST00000568151 FBXO40Q9UH90 709 aa26.74■■□□□ 1.87
SPG7-217ENST00000568151 DDX20Q9UHI6 824 aaKnown RBP26.74■■□□□ 1.87
SPG7-217ENST00000568151 TNKSO95271 1327 aa26.73■■□□□ 1.87
SPG7-217ENST00000568151 CNGA1P29973 690 aa26.73■■□□□ 1.87
SPG7-217ENST00000568151 SYDE2Q5VT97 1194 aa26.73■■□□□ 1.87
SPG7-217ENST00000568151 DDX11Q96FC9 970 aa26.73■■□□□ 1.87
SPG7-217ENST00000568151 TINF2Q9BSI4 451 aa26.73■■□□□ 1.87
SPG7-217ENST00000568151 RANBP17Q9H2T7 1088 aaKnown RBP26.73■■□□□ 1.87
SPG7-217ENST00000568151 CYB5R4Q7L1T6 521 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 NECAB2Q7Z6G3 386 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 PNMA1Q8ND90 353 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 ESYT1Q9BSJ8 1104 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 HTATIP2Q9BUP3 242 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 RNF146Q9NTX7 359 aa26.72■■□□□ 1.87
SPG7-217ENST00000568151 ANKRD35Q8N283 1001 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 UBAC1Q9BSL1 405 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 ACAD9Q9H845 621 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 KAT14Q9H8E8 782 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 RBM8AQ9Y5S9 174 aaKnown RBP26.71■■□□□ 1.87
SPG7-217ENST00000568151 CEP290O15078 2479 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 ALPK3Q96L96 1907 aa26.71■■□□□ 1.87
SPG7-217ENST00000568151 MSCO60682 206 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 GOLGA8HP0CJ92 632 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 ALAS1P13196 640 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 TAL1P17542 331 aaPredicted RBP26.7■■□□□ 1.86
SPG7-217ENST00000568151 SEC23AQ15436 765 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 TKFCQ3LXA3 575 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 STOX1Q6ZVD7 989 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 DPF3Q92784 378 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 FGD4Q96M96 766 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 TRERF1Q96PN7 1200 aa26.7■■□□□ 1.86
SPG7-217ENST00000568151 LSG1Q9H089 658 aaKnown RBP26.7■■□□□ 1.86
SPG7-217ENST00000568151 E7EWF7 191 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 SEPT4O43236 478 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 ICAM1P05362 532 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 TRDNQ13061 729 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 A1CFQ9NQ94 594 aaKnown RBP26.69■■□□□ 1.86
SPG7-217ENST00000568151 NRBP1Q9UHY1 535 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 CCPG1Q9ULG6 757 aa26.69■■□□□ 1.86
SPG7-217ENST00000568151 MUM1L1Q5H9M0 696 aa26.68■■□□□ 1.86
SPG7-217ENST00000568151 GPATCH4Q5T3I0 446 aaKnown RBP26.68■■□□□ 1.86
SPG7-217ENST00000568151 KIAA1211Q6ZU35 1233 aa26.68■■□□□ 1.86
SPG7-217ENST00000568151 ZNF467Q7Z7K2 595 aaPredicted RBP26.68■■□□□ 1.86
SPG7-217ENST00000568151 C11orf49Q9H6J7 331 aa26.68■■□□□ 1.86
SPG7-217ENST00000568151 MCM3APO60318 1980 aa26.67■■□□□ 1.86
SPG7-217ENST00000568151 NEFLP07196 543 aa26.67■■□□□ 1.86
SPG7-217ENST00000568151 ANO1Q5XXA6 986 aa26.67■■□□□ 1.86
SPG7-217ENST00000568151 MAMDC4Q6UXC1 1216 aa26.67■■□□□ 1.86
SPG7-217ENST00000568151 MSL3Q8N5Y2 521 aaKnown RBP26.67■■□□□ 1.86
SPG7-217ENST00000568151 CPVLQ9H3G5 476 aa26.67■■□□□ 1.86
SPG7-217ENST00000568151 SNAI1O95863 264 aaPredicted RBP26.66■■□□□ 1.86
SPG7-217ENST00000568151 ZNF865P0CJ78 1059 aaPredicted RBP26.66■■□□□ 1.86
SPG7-217ENST00000568151 COL6A1P12109 1028 aa26.66■■□□□ 1.86
SPG7-217ENST00000568151 IFIT1BQ5T764 474 aaKnown RBP26.66■■□□□ 1.86
SPG7-217ENST00000568151 FAM133AQ8N9E0 248 aa26.66■■□□□ 1.86
SPG7-217ENST00000568151 UBA5Q9GZZ9 404 aa26.66■■□□□ 1.86
SPG7-217ENST00000568151 PFASO15067 1338 aa26.65■■□□□ 1.86
SPG7-217ENST00000568151 SYNGAP1Q96PV0 1343 aa26.65■■□□□ 1.86
SPG7-217ENST00000568151 H0YGN5 161 aa26.65■■□□□ 1.86
SPG7-217ENST00000568151 CNTN2Q02246 1040 aa26.65■■□□□ 1.86
SPG7-217ENST00000568151 NCOA7Q8NI08 942 aa26.65■■□□□ 1.86
SPG7-217ENST00000568151 POTEB2H3BUK9 544 aa26.64■■□□□ 1.86
SPG7-217ENST00000568151 ASPRV1Q53RT3 343 aa26.64■■□□□ 1.86
SPG7-217ENST00000568151 RALYLQ86SE5 291 aaKnown RBP26.64■■□□□ 1.86
SPG7-217ENST00000568151 CNPY2Q9Y2B0 182 aa26.64■■□□□ 1.86
SPG7-217ENST00000568151 LCTP09848 1927 aa26.64■■□□□ 1.86
SPG7-217ENST00000568151 CHST3Q7LGC8 479 aa26.63■■□□□ 1.85
SPG7-217ENST00000568151 MB21D2Q8IYB1 491 aaPredicted RBP26.63■■□□□ 1.85
SPG7-217ENST00000568151 SENP2Q9HC62 589 aa26.63■■□□□ 1.85
SPG7-217ENST00000568151 ANO2Q9NQ90 1003 aa26.63■■□□□ 1.85
SPG7-217ENST00000568151 CYP39A1Q9NYL5 469 aa26.63■■□□□ 1.85
SPG7-217ENST00000568151 SOWAHBA6NEL2 793 aa26.62■■□□□ 1.85
SPG7-217ENST00000568151 IFIT3O14879 490 aaKnown RBP26.62■■□□□ 1.85
SPG7-217ENST00000568151 PARP1P09874 1014 aaKnown RBP26.62■■□□□ 1.85
SPG7-217ENST00000568151 ANTXR2P58335 489 aa26.62■■□□□ 1.85
SPG7-217ENST00000568151 ASTN1O14525 1302 aa26.62■■□□□ 1.85
SPG7-217ENST00000568151 WDR19Q8NEZ3 1342 aa26.62■■□□□ 1.85
SPG7-217ENST00000568151 DNM1LO00429 736 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 NFIBO00712 420 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 SLC27A2O14975 620 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 EVI5O60447 810 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 CDC45O75419 566 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 NECTIN1Q15223 517 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 NSMFQ6X4W1 530 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 ARMCX2Q7L311 632 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 CLEC4DQ8WXI8 215 aa26.61■■□□□ 1.85
SPG7-217ENST00000568151 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.61■■□□□ 1.85
SPG7-217ENST00000568151 DNAH12Q6ZR08 3092 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 GJC2Q5T442 439 aaPredicted RBP26.6■■□□□ 1.85
SPG7-217ENST00000568151 CREB3L3Q68CJ9 461 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 CCDC144CPQ8IYA2 1237 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 ADGRF4Q8IZF3 695 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 STAG2Q8N3U4 1231 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 ARRDC4Q8NCT1 418 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 PURBQ96QR8 312 aaKnown RBP26.6■■□□□ 1.85
SPG7-217ENST00000568151 PNMA2Q9UL42 364 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 NR2E3Q9Y5X4 410 aa26.6■■□□□ 1.85
SPG7-217ENST00000568151 AKR1A1P14550 325 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms