RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 NUP88Q99567 741 aaPredicted RBP13.17□□□□□ -0.3
CDH3-206ENST00000567674 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
CDH3-206ENST00000567674 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
CDH3-206ENST00000567674 ABHD16BQ9H3Z7 469 aa13.17□□□□□ -0.3
CDH3-206ENST00000567674 VCANP13611 3396 aa13.17□□□□□ -0.3
CDH3-206ENST00000567674 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 ASB14A6NK59 587 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 ICAM1P05362 532 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 AKR1A1P14550 325 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 CNGA1P29973 690 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 NKX3-2P78367 333 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 RNF180Q86T96 592 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
CDH3-206ENST00000567674 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
CDH3-206ENST00000567674 TOMM22Q9NS69 142 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 FAM184BQ9ULE4 1060 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 RIPK3Q9Y572 518 aa13.16□□□□□ -0.3
CDH3-206ENST00000567674 WDR19Q8NEZ3 1342 aa13.15□□□□□ -0.3
CDH3-206ENST00000567674 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
CDH3-206ENST00000567674 RARBP10826 455 aa13.15□□□□□ -0.3
CDH3-206ENST00000567674 TRAF1Q13077 416 aa13.15□□□□□ -0.3
CDH3-206ENST00000567674 IKQ13123 557 aaPredicted RBP13.15□□□□□ -0.3
CDH3-206ENST00000567674 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
CDH3-206ENST00000567674 U3KPZ7 1027 aaPredicted RBP13.15□□□□□ -0.3
CDH3-206ENST00000567674 ZNF536O15090 1300 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 COL11A1P12107 1806 aaPredicted RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 ZNFX1Q9P2E3 1918 aaKnown RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 MOXD2PA6NHM9 499 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 ZNF865P0CJ78 1059 aaPredicted RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 PDHBP11177 359 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 ZNF543Q08ER8 600 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 TRDNQ13061 729 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 SNX17Q15036 470 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 TDHQ8IZJ6 230 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 CPXCR1Q8N123 301 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 SAMD3Q8N6K7 520 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 FAM133AQ8N9E0 248 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
CDH3-206ENST00000567674 Q9Y3F1 56 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 TACC3Q9Y6A5 838 aa13.14□□□□□ -0.31
CDH3-206ENST00000567674 SPTBN5Q9NRC6 3674 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 B4DLN1 442 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 CHMLP26374 656 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 PDE4AP27815 886 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 CST5P28325 142 aaPredicted RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 MRPL12P52815 198 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 ASPRV1Q53RT3 343 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 RRP12Q5JTH9 1297 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 DIS3LQ8TF46 1054 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 TRERF1Q96PN7 1200 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 ZSWIM5Q9P217 1185 aa13.13□□□□□ -0.31
CDH3-206ENST00000567674 ADD3Q9UEY8 706 aaKnown RBP13.13□□□□□ -0.31
CDH3-206ENST00000567674 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 NMT2O60551 498 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 SNAI1O95863 264 aaPredicted RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 PGK2P07205 417 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 ACVR2BQ13705 512 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 LRRC41Q15345 812 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 DNERQ8NFT8 737 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 NUP133Q8WUM0 1156 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 MAP4K1Q92918 833 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 A1CFQ9NQ94 594 aaKnown RBP13.12□□□□□ -0.31
CDH3-206ENST00000567674 XPNPEP3Q9NQH7 507 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 INCENPQ9NQS7 918 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 RNF146Q9NTX7 359 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 PHF24Q9UPV7 400 aa13.12□□□□□ -0.31
CDH3-206ENST00000567674 SGSM2O43147 1006 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 HAND2P61296 217 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 IQSEC1Q6DN90 963 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 UBAC1Q9BSL1 405 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 SENP6Q9GZR1 1112 aaPredicted RBP13.11□□□□□ -0.31
CDH3-206ENST00000567674 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.11□□□□□ -0.31
CDH3-206ENST00000567674 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 ELP1O95163 1332 aa13.11□□□□□ -0.31
CDH3-206ENST00000567674 KDM4AO75164 1064 aa13.1□□□□□ -0.31
CDH3-206ENST00000567674 COL9A1P20849 921 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms