RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CPVLQ9H3G5 476 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 LONP1P36776 959 aaKnown RBP26.4■■□□□ 1.82
LINC00543-201ENST00000567234 TCP10Q12799 353 aa26.4■■□□□ 1.82
LINC00543-201ENST00000567234 SPATA20Q8TB22 786 aa26.4■■□□□ 1.82
LINC00543-201ENST00000567234 EPSTI1Q96J88 318 aa26.4■■□□□ 1.82
LINC00543-201ENST00000567234 NYAP2Q9P242 653 aa26.4■■□□□ 1.82
LINC00543-201ENST00000567234 VWA3AA6NCI4 1184 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 SMCO2A6NFE2 343 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 MPHOSPH10O00566 681 aaKnown RBP26.39■■□□□ 1.82
LINC00543-201ENST00000567234 PRELPP51888 382 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 CACNB3P54284 484 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 RSBN1LQ6PCB5 846 aaPredicted RBP26.39■■□□□ 1.82
LINC00543-201ENST00000567234 SH3BP5LQ7L8J4 393 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 HOMER1Q86YM7 354 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 RASGRP4Q8TDF6 673 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 UBA5Q9GZZ9 404 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 KANSL2Q9H9L4 492 aa26.39■■□□□ 1.82
LINC00543-201ENST00000567234 CERKLQ49MI3 558 aaPredicted RBP26.39■■□□□ 1.81
LINC00543-201ENST00000567234 SH3RF1Q7Z6J0 888 aa26.39■■□□□ 1.81
LINC00543-201ENST00000567234 PDILTQ8N807 584 aa26.39■■□□□ 1.81
LINC00543-201ENST00000567234 SPC24Q8NBT2 197 aa26.39■■□□□ 1.81
LINC00543-201ENST00000567234 SMARCE1Q969G3 411 aa26.39■■□□□ 1.81
LINC00543-201ENST00000567234 TRIM34Q9BYJ4 488 aa26.39■■□□□ 1.81
LINC00543-201ENST00000567234 VIL1P09327 827 aaKnown RBP26.38■■□□□ 1.81
LINC00543-201ENST00000567234 EIF6P56537 245 aaKnown RBP26.38■■□□□ 1.81
LINC00543-201ENST00000567234 ORC2Q13416 577 aaPredicted RBP26.38■■□□□ 1.81
LINC00543-201ENST00000567234 NCAPHQ15003 741 aa26.38■■□□□ 1.81
LINC00543-201ENST00000567234 PPP1R18Q6NYC8 613 aa26.38■■□□□ 1.81
LINC00543-201ENST00000567234 ZSCAN29Q8IWY8 852 aaPredicted RBP26.38■■□□□ 1.81
LINC00543-201ENST00000567234 VAT1LQ9HCJ6 419 aa26.38■■□□□ 1.81
LINC00543-201ENST00000567234 FRMPD2Q68DX3 1309 aaPredicted RBP26.38■■□□□ 1.81
LINC00543-201ENST00000567234 FOXN1O15353 648 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 MYO1BO43795 1136 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 RAD17O75943 681 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 SMC2O95347 1197 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 DRC7Q8IY82 874 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 TDRD3Q9H7E2 651 aaKnown RBP26.37■■□□□ 1.81
LINC00543-201ENST00000567234 DACH1Q9UI36 760 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 A0A087X0B3 334 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 PRPHP41219 470 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 NONOQ15233 471 aaKnown RBP eCLIP26.37■■□□□ 1.81
LINC00543-201ENST00000567234 CLEC10AQ8IUN9 316 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 MLKLQ8NB16 471 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 DHX58Q96C10 678 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 ZNF830Q96NB3 372 aaPredicted RBP26.37■■□□□ 1.81
LINC00543-201ENST00000567234 GMLQ99445 158 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 MAN1B1Q9UKM7 699 aa26.37■■□□□ 1.81
LINC00543-201ENST00000567234 PNMA6FA0A0J9YX94 578 aa26.36■■□□□ 1.81
LINC00543-201ENST00000567234 INF2Q27J81 1249 aa26.36■■□□□ 1.81
LINC00543-201ENST00000567234 TMEM179Q6ZVK1 233 aa26.36■■□□□ 1.81
LINC00543-201ENST00000567234 PRMT6Q96LA8 375 aaPredicted RBP26.36■■□□□ 1.81
LINC00543-201ENST00000567234 HDAC9Q9UKV0 1011 aa26.36■■□□□ 1.81
LINC00543-201ENST00000567234 MORC3Q14149 939 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 IL17AQ16552 155 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 CT47A1Q5JQC4 288 aaPredicted RBP26.35■■□□□ 1.81
LINC00543-201ENST00000567234 IQUBQ8NA54 791 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 KCNF1Q9H3M0 494 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 GPCPD1Q9NPB8 672 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 PRR29P0C7W0 189 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 MYL5Q02045 173 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 ISM2Q6H9L7 571 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 NIM1KQ8IY84 436 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 DCAF4Q8WV16 495 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 MTMR8Q96EF0 704 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 JMJD4Q9H9V9 463 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 TMOD2Q9NZR1 351 aa26.35■■□□□ 1.81
LINC00543-201ENST00000567234 TXLNAP40222 546 aa26.34■■□□□ 1.81
LINC00543-201ENST00000567234 E2F4Q16254 413 aa26.34■■□□□ 1.81
LINC00543-201ENST00000567234 DTHD1Q6ZMT9 781 aa26.34■■□□□ 1.81
LINC00543-201ENST00000567234 ADGRF4Q8IZF3 695 aa26.34■■□□□ 1.81
LINC00543-201ENST00000567234 REXO1Q8N1G1 1221 aaKnown RBP26.34■■□□□ 1.81
LINC00543-201ENST00000567234 PAGE5Q96GU1 130 aa26.34■■□□□ 1.81
LINC00543-201ENST00000567234 SPDYE2BA6NHP3 402 aa26.33■■□□□ 1.81
LINC00543-201ENST00000567234 PSMD14O00487 310 aa26.33■■□□□ 1.81
LINC00543-201ENST00000567234 SPDYE6P0CI01 402 aa26.33■■□□□ 1.81
LINC00543-201ENST00000567234 EEF2P13639 858 aaKnown RBP26.32■■□□□ 1.8
LINC00543-201ENST00000567234 BMP6P22004 513 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 NEK8Q86SG6 692 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 GSDMAQ96QA5 445 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 ARID3AQ99856 593 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 HERC5Q9UII4 1024 aaKnown RBP26.32■■□□□ 1.8
LINC00543-201ENST00000567234 ZNRF3Q9ULT6 936 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 LTBP3Q9NS15 1303 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 ADCY7P51828 1080 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 ATP2B2Q01814 1243 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 CCDC96Q2M329 555 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 CCDC186Q7Z3E2 898 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 OGFOD1Q8N543 542 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 DDX41Q9UJV9 622 aaKnown RBP26.32■■□□□ 1.8
LINC00543-201ENST00000567234 SYNPO2Q9UMS6 1093 aa26.32■■□□□ 1.8
LINC00543-201ENST00000567234 NEMFO60524 1076 aa26.31■■□□□ 1.8
LINC00543-201ENST00000567234 ABCB5Q2M3G0 1257 aa26.31■■□□□ 1.8
LINC00543-201ENST00000567234 PYCARDQ9ULZ3 195 aa26.31■■□□□ 1.8
LINC00543-201ENST00000567234 ZBTB12Q9Y330 459 aaPredicted RBP26.31■■□□□ 1.8
LINC00543-201ENST00000567234 ZBTB5O15062 677 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 PTGS1P23219 599 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 NCBP1Q09161 790 aaKnown RBP26.3■■□□□ 1.8
LINC00543-201ENST00000567234 DPYDQ12882 1025 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 GRAMD1CQ8IYS0 662 aa26.3■■□□□ 1.8
LINC00543-201ENST00000567234 MTMR14Q8NCE2 650 aa26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms