RNA–Protein interactions for RNA: ENST00000567223.6

SMPD3-209, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-209ENST00000567223 PDE4AP27815 886 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 CCDC178Q5BJE1 867 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 TTC22Q5TAA0 569 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 KCTD1Q719H9 257 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 DGKHQ86XP1 1220 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 ANKRD35Q8N283 1001 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 FGD4Q96M96 766 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 SENP6Q9GZR1 1112 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-209ENST00000567223 RANBP17Q9H2T7 1088 aaKnown RBP21.97■■□□□ 1.11
SMPD3-209ENST00000567223 TOMM22Q9NS69 142 aa21.97■■□□□ 1.11
SMPD3-209ENST00000567223 SNAI1O95863 264 aaPredicted RBP21.96■■□□□ 1.11
SMPD3-209ENST00000567223 HAND2P61296 217 aa21.96■■□□□ 1.11
SMPD3-209ENST00000567223 LRRC41Q15345 812 aa21.96■■□□□ 1.11
SMPD3-209ENST00000567223 RRP12Q5JTH9 1297 aaKnown RBP21.96■■□□□ 1.11
SMPD3-209ENST00000567223 FAM133AQ8N9E0 248 aa21.96■■□□□ 1.11
SMPD3-209ENST00000567223 CTNNA3Q9UI47 895 aa21.96■■□□□ 1.11
SMPD3-209ENST00000567223 TRIOBPQ9H2D6 2365 aa21.96■■□□□ 1.11
SMPD3-209ENST00000567223 ICAM1P05362 532 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 PDHBP11177 359 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 GSPT1P15170 499 aaKnown RBP21.95■■□□□ 1.1
SMPD3-209ENST00000567223 IKQ13123 557 aaPredicted RBP21.95■■□□□ 1.1
SMPD3-209ENST00000567223 ANKS1AQ92625 1134 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 ABHD16BQ9H3Z7 469 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 A1CFQ9NQ94 594 aaKnown RBP21.95■■□□□ 1.1
SMPD3-209ENST00000567223 XPNPEP3Q9NQH7 507 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 RNF146Q9NTX7 359 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 PHF24Q9UPV7 400 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 NEDD4P46934 1319 aa21.95■■□□□ 1.1
SMPD3-209ENST00000567223 TAL1P17542 331 aaPredicted RBP21.94■■□□□ 1.1
SMPD3-209ENST00000567223 IMMTQ16891 758 aaKnown RBP21.94■■□□□ 1.1
SMPD3-209ENST00000567223 GJC2Q5T442 439 aaPredicted RBP21.94■■□□□ 1.1
SMPD3-209ENST00000567223 RNF180Q86T96 592 aa21.94■■□□□ 1.1
SMPD3-209ENST00000567223 AGBL1Q96MI9 1066 aa21.94■■□□□ 1.1
SMPD3-209ENST00000567223 TSEN34Q9BSV6 310 aaKnown RBP21.94■■□□□ 1.1
SMPD3-209ENST00000567223 FAM184BQ9ULE4 1060 aa21.94■■□□□ 1.1
SMPD3-209ENST00000567223 LOC102724159A0A0B4J2E5 919 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 ADAMTS4O75173 837 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 NKX3-2P78367 333 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 PWP2Q15269 919 aaKnown RBP21.93■■□□□ 1.1
SMPD3-209ENST00000567223 GPATCH4Q5T3I0 446 aaKnown RBP21.93■■□□□ 1.1
SMPD3-209ENST00000567223 SLC39A5Q6ZMH5 540 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 RASGRP2Q7LDG7 609 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 IQCA1Q86XH1 822 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 TRERF1Q96PN7 1200 aa21.93■■□□□ 1.1
SMPD3-209ENST00000567223 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.93■■□□□ 1.1
SMPD3-209ENST00000567223 ZMYND8Q9ULU4 1186 aaPredicted RBP21.93■■□□□ 1.1
SMPD3-209ENST00000567223 DUSP11O75319 330 aaKnown RBP21.92■■□□□ 1.1
SMPD3-209ENST00000567223 CST5P28325 142 aaPredicted RBP21.92■■□□□ 1.1
SMPD3-209ENST00000567223 ZNF543Q08ER8 600 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 ACVR2BQ13705 512 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 CCDC96Q2M329 555 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 SYDE2Q5VT97 1194 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 ANO1Q5XXA6 986 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 MAF1Q9H063 256 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 KATNBL1Q9H079 304 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 CNNM2Q9H8M5 875 aa21.92■■□□□ 1.1
SMPD3-209ENST00000567223 ISY1Q9ULR0 285 aaKnown RBP21.92■■□□□ 1.1
SMPD3-209ENST00000567223 WDR19Q8NEZ3 1342 aa21.91■■□□□ 1.1
SMPD3-209ENST00000567223 POTEB2H3BUK9 544 aa21.91■■□□□ 1.1
SMPD3-209ENST00000567223 MAGEA10P43363 369 aaPredicted RBP21.91■■□□□ 1.1
SMPD3-209ENST00000567223 ARMCX2Q7L311 632 aa21.91■■□□□ 1.1
SMPD3-209ENST00000567223 HOMER2Q9NSB8 354 aa21.91■■□□□ 1.1
SMPD3-209ENST00000567223 CYP39A1Q9NYL5 469 aa21.91■■□□□ 1.1
SMPD3-209ENST00000567223 SMCHD1A6NHR9 2005 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 SYNRGQ9UMZ2 1314 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 MOXD2PA6NHM9 499 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 ASB14A6NK59 587 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 ALAS1P13196 640 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 RTP1P59025 263 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 CCSAPQ6IQ19 270 aaPredicted RBP21.9■■□□□ 1.1
SMPD3-209ENST00000567223 CCDC144CPQ8IYA2 1237 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 KLHDC9Q8NEP7 349 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 MORC4Q8TE76 937 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 RUFY2Q8WXA3 655 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 KRT23Q9C075 422 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 IL25Q9H293 177 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 CCPG1Q9ULG6 757 aa21.9■■□□□ 1.1
SMPD3-209ENST00000567223 KDM4AO75164 1064 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 SYN1P17600 705 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 SLC4A3P48751 1232 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 TTBK2Q6IQ55 1244 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 GPR153Q6NV75 609 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 CCDC174Q6PII3 467 aa21.89■■□□□ 1.09
SMPD3-209ENST00000567223 UPF3AQ9H1J1 476 aaKnown RBP21.89■■□□□ 1.09
SMPD3-209ENST00000567223 SOWAHBA6NEL2 793 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 PGK1P00558 417 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ADCYAP1R1P41586 468 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ATN1P54259 1190 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-209ENST00000567223 CNTN2Q02246 1040 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 LRIT3Q3SXY7 679 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 MUM1L1Q5H9M0 696 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 TDHQ8IZJ6 230 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ZSCAN10Q96SZ4 725 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ZSWIM5Q9P217 1185 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ZHX1Q9UKY1 873 aaPredicted RBP21.88■■□□□ 1.09
SMPD3-209ENST00000567223 LRRC37A2A6NM11 1700 aa21.88■■□□□ 1.09
SMPD3-209ENST00000567223 ASTN1O14525 1302 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 CHMLP26374 656 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 SLC16A2P36021 539 aa21.87■■□□□ 1.09
SMPD3-209ENST00000567223 GJA9P57773 515 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms