RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 LDHAP00338 332 aaKnown RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 SNRPB2P08579 225 aaKnown RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 ZSCAN20P17040 1043 aaPredicted RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 KCNA6P17658 529 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 HOXC12P31275 282 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 ECI1P42126 302 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 NOL9Q5SY16 702 aaKnown RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 NXNQ6DKJ4 435 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 ZCCHC8Q6NZY4 707 aaKnown RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 USP53Q70EK8 1073 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 MAMDC2Q7Z304 686 aaPredicted RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 NXPE1Q8N323 547 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 JPH3Q8WXH2 748 aaPredicted RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 CCDC140Q96MF4 163 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 KREMEN1Q96MU8 473 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 CAMKK2Q96RR4 588 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 RHOBTB2Q9BYZ6 727 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 NKX2-4Q9H2Z4 354 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 NOL6Q9H6R4 1146 aaKnown RBP7.56□□□□□ -1.2
KARS-208ENST00000566772 CEP131Q9UPN4 1083 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 SPEF1Q9Y4P9 236 aa7.56□□□□□ -1.2
KARS-208ENST00000566772 MRC2Q9UBG0 1479 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 ZNF891A8MT65 544 aaPredicted RBP7.55□□□□□ -1.2
KARS-208ENST00000566772 B4E1Z4 1266 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 PRKD3O94806 890 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 ABLIM3O94929 683 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 FBXO21O94952 628 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 GRB10Q13322 594 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 SLC35F1Q5T1Q4 408 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 ABHD17CQ6PCB6 329 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 KCNT2Q6UVM3 1135 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 MAGEB6Q8N7X4 407 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 EVI5LQ96CN4 794 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 C1orf159Q96HA4 380 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 SSU72Q9NP77 194 aaKnown RBP7.55□□□□□ -1.2
KARS-208ENST00000566772 SAMD15Q9P1V8 674 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 IP6K2Q9UHH9 426 aa7.55□□□□□ -1.2
KARS-208ENST00000566772 APOBEC2Q9Y235 224 aaKnown RBP7.55□□□□□ -1.2
KARS-208ENST00000566772 WIZO95785 1651 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 GOLGA6CA6NDK9 693 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 GOLGA6BA6NDN3 693 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 RBAK-RBAKDNI3L0D1 243 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 VAMP4O75379 141 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 RFPL1O75677 317 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 GOLGA6DP0CG33 693 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 ADH5P11766 374 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 DRD2P14416 443 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 RNF4P78317 190 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 CYP4F3Q08477 520 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 PTPN21Q16825 1174 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 ARMCX6Q7L4S7 300 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 DYMQ7RTS9 669 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 SAMD3Q8N6K7 520 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 GOLGA6AQ9NYA3 693 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 DIS3Q9Y2L1 958 aaKnown RBP7.54□□□□□ -1.2
KARS-208ENST00000566772 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
KARS-208ENST00000566772 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
KARS-208ENST00000566772 WDR62O43379 1518 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 KRBA1A5PL33 1030 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 WISP1O95388 367 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 SCG5P05408 212 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 PDE6BP35913 854 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 ADCYAP1R1P41586 468 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 GUCY1A3Q02108 690 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 SOX4Q06945 474 aaPredicted RBP7.53□□□□□ -1.2
KARS-208ENST00000566772 TCIRG1Q13488 830 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 BRD3Q15059 726 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 ABCB5Q2M3G0 1257 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 GFOD2Q3B7J2 385 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 NBPF9Q3BBW0 867 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 NUTM2GQ5VZR2 741 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 STYK1Q6J9G0 422 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 CDH24Q86UP0 819 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 ANKLE2Q86XL3 938 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.53□□□□□ -1.2
KARS-208ENST00000566772 FIBCD1Q8N539 461 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 SYTL5Q8TDW5 730 aaPredicted RBP7.53□□□□□ -1.2
KARS-208ENST00000566772 ZDHHC15Q96MV8 337 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 ORAI3Q9BRQ5 295 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 PIDD1Q9HB75 910 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 CYP26B1Q9NR63 512 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 PCDHA8Q9Y5H6 950 aa7.53□□□□□ -1.2
KARS-208ENST00000566772 CEP164Q9UPV0 1460 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 MEGF11A6BM72 1044 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 CBX4O00257 560 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.21
KARS-208ENST00000566772 LRIG2O94898 1065 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 CPP00450 1065 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 F2P00734 622 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 ASPAP45381 313 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 IL2P60568 153 aa7.52□□□□□ -1.21
KARS-208ENST00000566772 SNW1Q13573 536 aaKnown RBP7.52□□□□□ -1.21
KARS-208ENST00000566772 COL9A3Q14050 684 aaPredicted RBP7.52□□□□□ -1.21
KARS-208ENST00000566772 SART3Q15020 963 aaKnown RBP7.52□□□□□ -1.21
KARS-208ENST00000566772 IQSEC1Q6DN90 963 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms