RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 VAT1LQ9HCJ6 419 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 RWDD2AQ9UIY3 292 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 A0A087X0B3 334 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 IGKV6D-41A0A0C4DH26 115 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 PNMA6FA0A0J9YX94 578 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 RPN1P04843 607 aaKnown RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 RBM5P52756 815 aaKnown RBP eCLIP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 KCNB1Q14721 858 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 ARID5BQ14865 1188 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 CCDC96Q2M329 555 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 LETM2Q2VYF4 491 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 CDC42EP5Q6NZY7 148 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 ARMCX5Q6P1M9 558 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 SLC51AQ86UW1 340 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 C4orf32Q8N8J7 132 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 RASGRP4Q8TDF6 673 aa15.09■□□□□ 0.01
LINC00563-201ENST00000566370 NOC3LQ8WTT2 800 aaKnown RBP15.09■□□□□ 0.01
LINC00563-201ENST00000566370 BAZ2BQ9UIF8 2168 aaKnown RBP15.08■□□□□ 0
LINC00563-201ENST00000566370 USP17L5A8MUK1 530 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 RIOK3O14730 519 aaKnown RBP15.08■□□□□ 0
LINC00563-201ENST00000566370 SNHG28P0DPA3 235 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 AKR1B1P15121 316 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 RXRBP28702 533 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 SCNN1DP51172 638 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 MRPL12P52815 198 aaKnown RBP15.08■□□□□ 0
LINC00563-201ENST00000566370 FMR1Q06787 632 aaKnown RBP eCLIP15.08■□□□□ 0
LINC00563-201ENST00000566370 ZNF543Q08ER8 600 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 CUL4BQ13620 913 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 TRIM14Q14142 442 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 CABP7Q86V35 215 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 TRMT44Q8IYL2 757 aaKnown RBP15.08■□□□□ 0
LINC00563-201ENST00000566370 CERS5Q8N5B7 392 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 ZNF592Q92610 1267 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 CDK5RAP3Q96JB5 506 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 NAA15Q9BXJ9 866 aaKnown RBP15.08■□□□□ 0
LINC00563-201ENST00000566370 PDCL3Q9H2J4 239 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 CTNND2Q9UQB3 1225 aa15.08■□□□□ 0
LINC00563-201ENST00000566370 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.08■□□□□ 0
LINC00563-201ENST00000566370 A0A1B0GTH6 734 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 WNT7AO00755 349 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 PSMA7O14818 248 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 STX10O60499 249 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 TRAF1Q13077 416 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 KARSQ15046 597 aaKnown RBP15.07■□□□□ 0
LINC00563-201ENST00000566370 TYW1BQ6NUM6 668 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 NYAP1Q6ZVC0 841 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 DCAF4Q8WV16 495 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 CUL5Q93034 780 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 CCDC51Q96ER9 411 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 STK32BQ9NY57 414 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 TMOD2Q9NZR1 351 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 MAGEC2Q9UBF1 373 aaPredicted RBP15.07■□□□□ 0
LINC00563-201ENST00000566370 PI4KBQ9UBF8 816 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 SERPINA10Q9UK55 444 aa15.07■□□□□ 0
LINC00563-201ENST00000566370 BICDL2A1A5D9 508 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 PPP1R3GB7ZBB8 358 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 AKR1B15C9JRZ8 316 aaPredicted RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 H7C1D1 291 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 ECE2O60344 883 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 VEGFAP15692 232 aaPredicted RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 GCFC2P16383 781 aaKnown RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 ATP2B2Q01814 1243 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 CDKAL1Q5VV42 579 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 FRMPD2Q68DX3 1309 aaPredicted RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 CNGA4Q8IV77 575 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 FAM114A1Q8IWE2 563 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 ZSCAN29Q8IWY8 852 aaPredicted RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 TBCKQ8TEA7 893 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 DPF2Q92785 391 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 BAG1Q99933 345 aaPredicted RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 IDI2Q9BXS1 227 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 TRMT1Q9NXH9 659 aaKnown RBP15.06■□□□□ 0
LINC00563-201ENST00000566370 STK17AQ9UEE5 414 aa15.06■□□□□ 0
LINC00563-201ENST00000566370 ITIH6Q6UXX5 1313 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 MARCH6O60337 910 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 SHMT1P34896 483 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 NR1I3Q14994 352 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 IL17AQ16552 155 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 CALCRLQ16602 461 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 NELFBQ8WX92 580 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 PPP1R13BQ96KQ4 1090 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 PANX2Q96RD6 677 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 UBA5Q9GZZ9 404 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 BLZF1Q9H2G9 400 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 DBNDD1Q9H9R9 158 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 GPCPD1Q9NPB8 672 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 RIC8AQ9NPQ8 531 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 DDX4Q9NQI0 724 aaKnown RBP15.05■□□□□ -0
LINC00563-201ENST00000566370 SAMSN1Q9NSI8 373 aaKnown RBP15.05■□□□□ -0
LINC00563-201ENST00000566370 EXOC1Q9NV70 894 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 NYAP2Q9P242 653 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 MYH4Q9Y623 1939 aa15.05■□□□□ -0
LINC00563-201ENST00000566370 TNS1Q9HBL0 1735 aaKnown RBP15.05■□□□□ -0
LINC00563-201ENST00000566370 COL2A1P02458 1487 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms