RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CCSER1Q9C0I3 900 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 EFCC1Q9HA90 598 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 ZNHIT6Q9NWK9 470 aaKnown RBP24.22■■□□□ 1.47
SPSB3-208ENST00000566339 RRP15Q9Y3B9 282 aaKnown RBP24.22■■□□□ 1.47
SPSB3-208ENST00000566339 COL5A3P25940 1745 aaPredicted RBP24.22■■□□□ 1.47
SPSB3-208ENST00000566339 CACNA1SQ13698 1873 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 MYH8P13535 1937 aa24.22■■□□□ 1.47
SPSB3-208ENST00000566339 A0A1W2PQJ5 194 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 PSMA7O14818 248 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 RHOBTB3O94955 611 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 SRGNP10124 158 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 PRCPP42785 496 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 NOA1Q8NC60 698 aaKnown RBP24.21■■□□□ 1.47
SPSB3-208ENST00000566339 CCDC102AQ96A19 550 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 DISC1Q9NRI5 854 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 KAT6BQ8WYB5 2073 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 TTC26A0AVF1 554 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 EXOC5O00471 708 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 PRDM1O75626 825 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 STAT6P42226 847 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 COBLL1Q53SF7 1204 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 SUSD4Q5VX71 490 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 CCDC70Q6NSX1 233 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 INTS5Q6P9B9 1019 aaKnown RBP24.21■■□□□ 1.47
SPSB3-208ENST00000566339 IRF2BP1Q8IU81 584 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 CCDC47Q96A33 483 aaKnown RBP24.21■■□□□ 1.47
SPSB3-208ENST00000566339 PURBQ96QR8 312 aaKnown RBP24.21■■□□□ 1.47
SPSB3-208ENST00000566339 SCN7AQ01118 1682 aa24.21■■□□□ 1.47
SPSB3-208ENST00000566339 BICDL2A1A5D9 508 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 WNT7AO00755 349 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 IPO7O95373 1038 aaKnown RBP24.2■■□□□ 1.46
SPSB3-208ENST00000566339 PRPHP41219 470 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 CHRNDQ07001 517 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 CCDC178Q5BJE1 867 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 ZNF572Q7Z3I7 529 aaPredicted RBP24.2■■□□□ 1.46
SPSB3-208ENST00000566339 DAGLBQ8NCG7 672 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 SDR42E1Q8WUS8 393 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 FAM107BQ9H098 131 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 BLZF1Q9H2G9 400 aa24.2■■□□□ 1.46
SPSB3-208ENST00000566339 TNS1Q9HBL0 1735 aaKnown RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 RNF225M0QZC1 329 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 PRLRP16471 622 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 SBK1Q52WX2 424 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 SRBD1Q8N5C6 995 aaKnown RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 GIMAP8Q8ND71 665 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 AFAP1L1Q8TED9 768 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 CHP1Q99653 195 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 CCDC87Q9NVE4 849 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 GUCA1BQ9UMX6 200 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 LRRIQ3A6PVS8 624 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 APBA3O96018 575 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 GNAQP50148 359 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 GYS2P54840 703 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 HERVK_113P62684 666 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 ZBED6P86452 979 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 IL17AQ16552 155 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 CCDC122Q5T0U0 273 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 PIK3AP1Q6ZUJ8 805 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 BLIDQ8IZY5 108 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 MARCH10Q8NA82 808 aaPredicted RBP24.19■■□□□ 1.46
SPSB3-208ENST00000566339 COG1Q8WTW3 980 aa24.19■■□□□ 1.46
SPSB3-208ENST00000566339 LAMB1P07942 1786 aa24.18■■□□□ 1.46
SPSB3-208ENST00000566339 CAMTA2O94983 1202 aa24.18■■□□□ 1.46
SPSB3-208ENST00000566339 CLSTN1O94985 981 aa24.18■■□□□ 1.46
SPSB3-208ENST00000566339 JAKMIP2Q96AA8 810 aa24.18■■□□□ 1.46
SPSB3-208ENST00000566339 TTYH3Q9C0H2 523 aa24.18■■□□□ 1.46
SPSB3-208ENST00000566339 PRPF6O94906 941 aaKnown RBP24.17■■□□□ 1.46
SPSB3-208ENST00000566339 NCAPH2Q6IBW4 605 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 ADGRA1Q86SQ6 560 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 ANKS1AQ92625 1134 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 AK8Q96MA6 479 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 ATP8A2Q9NTI2 1148 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 EXOC1Q9NV70 894 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 KBTBD4Q9NVX7 518 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 HPCAL4Q9UM19 191 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 PCDHA4Q9UN74 947 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 COL4A1P02462 1669 aa24.17■■□□□ 1.46
SPSB3-208ENST00000566339 A6NNZ2 444 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 PPFIA4O75335 1185 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 CDC25AP30304 524 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 TUBB8Q3ZCM7 444 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 TTI2Q6NXR4 508 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 WDR59Q6PJI9 974 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 DTHD1Q6ZMT9 781 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 KIAA1328Q86T90 577 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 AMOTL1Q8IY63 956 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 ARPP21Q9UBL0 812 aaPredicted RBP24.16■■□□□ 1.46
SPSB3-208ENST00000566339 N4BP1O75113 896 aaKnown RBP24.16■■□□□ 1.46
SPSB3-208ENST00000566339 NTSR2O95665 410 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 ABL1P00519 1130 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 MCM7P33993 719 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 MAGEA9P43362 315 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 MMGT1Q8N4V1 131 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 GDAQ9Y2T3 454 aa24.16■■□□□ 1.46
SPSB3-208ENST00000566339 A0A0U1RQG5 324 aaPredicted RBP24.15■■□□□ 1.46
SPSB3-208ENST00000566339 KLRC4O43908 158 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 RNF40O75150 1001 aa24.15■■□□□ 1.46
SPSB3-208ENST00000566339 SYF2O95926 243 aaKnown RBP24.15■■□□□ 1.46
SPSB3-208ENST00000566339 HNRNPH3P31942 346 aaKnown RBP24.15■■□□□ 1.46
SPSB3-208ENST00000566339 EZH2Q15910 746 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms