RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 DPYSL4O14531 572 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 UQCRFS1P1P0C7P4 283 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 USP5P45974 858 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 CCL23P55773 120 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 TFCP2Q12800 502 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 ZNF792Q3KQV3 632 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 KRT40Q6A162 431 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 REV3LO60673 3130 aa13.56□□□□□ -0.24
CAPN3-215ENST00000565559 TRANK1O15050 2925 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 MYADML2A6NDP7 307 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 E9PSI1 815 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 CD4P01730 458 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 COPB2P35606 906 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 MCAMP43121 646 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 CERS3Q8IU89 383 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 MRPL50Q8N5N7 158 aaKnown RBP13.55□□□□□ -0.24
CAPN3-215ENST00000565559 ATG4CQ96DT6 458 aa13.55□□□□□ -0.24
CAPN3-215ENST00000565559 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 KIF28PB7ZC32 967 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
CAPN3-215ENST00000565559 IGSF3O75054 1194 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 PFKMP08237 780 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 SLFN5Q08AF3 891 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 SEPT2Q15019 361 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 ADGRA1Q86SQ6 560 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 FAM178BQ8IXR5 827 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 SEZ6LQ9BYH1 1024 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
CAPN3-215ENST00000565559 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 GBF1Q92538 1859 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 EPOPA6NHQ4 379 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 DCXO43602 365 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 ACTN1P12814 892 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 GJA9P57773 515 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
CAPN3-215ENST00000565559 GRB10Q13322 594 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 TMEM132BQ14DG7 1078 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 RIOX2Q8IUF8 465 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
CAPN3-215ENST00000565559 SLC9A7Q96T83 725 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 UMODL1Q5DID0 1318 aa13.53□□□□□ -0.24
CAPN3-215ENST00000565559 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 CABYRO75952 493 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 GUCY1A2P33402 732 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 SHMT1P34896 483 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 STAT3P40763 770 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 PHOSPHO2Q8TCD6 241 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 MFSD14AQ96MC6 490 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 HS3ST6Q96QI5 342 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 NOC4LQ9BVI4 516 aaKnown RBP13.52□□□□□ -0.25
CAPN3-215ENST00000565559 UPF3AQ9H1J1 476 aaKnown RBP13.52□□□□□ -0.25
CAPN3-215ENST00000565559 ZNF536O15090 1300 aa13.52□□□□□ -0.25
CAPN3-215ENST00000565559 SNAI1O95863 264 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-215ENST00000565559 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
CAPN3-215ENST00000565559 TAP1Q03518 808 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 LEXMQ3ZCV2 418 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 VARS2Q5ST30 1063 aaKnown RBP13.51□□□□□ -0.25
CAPN3-215ENST00000565559 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 DDX11Q96FC9 970 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 WNT8AQ9H1J5 351 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 UBE2ZQ9H832 354 aaPredicted RBP13.51□□□□□ -0.25
CAPN3-215ENST00000565559 ARHGEF10LQ9HCE6 1279 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 LMCD1Q9NZU5 365 aa13.51□□□□□ -0.25
CAPN3-215ENST00000565559 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
CAPN3-215ENST00000565559 CYP7A1P22680 504 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 ITGA7Q13683 1181 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 TTLL4Q14679 1199 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 PUS10Q3MIT2 529 aaKnown RBP13.5□□□□□ -0.25
CAPN3-215ENST00000565559 TTC39AQ5SRH9 613 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 SLC43A3Q8NBI5 491 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 SCLYQ96I15 445 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
CAPN3-215ENST00000565559 FOCADQ5VW36 1801 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 SRGAP3O43295 1099 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 ZEB2O60315 1214 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-215ENST00000565559 KCNA5P22460 613 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 CCDC144BQ3MJ40 725 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 CCDC158Q5M9N0 1113 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 PTCRAQ6ISU1 281 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-215ENST00000565559 CXCL17Q6UXB2 119 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 TMEM179Q6ZVK1 233 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 NOL8Q76FK4 1167 aaKnown RBP13.49□□□□□ -0.25
CAPN3-215ENST00000565559 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
CAPN3-215ENST00000565559 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.49□□□□□ -0.25
CAPN3-215ENST00000565559 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 LPXNO60711 386 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 IL9P15248 144 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 PTPN5P54829 565 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 KIAA1755Q5JYT7 1200 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 DEFB128Q7Z7B8 93 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 HERC6Q8IVU3 1022 aa13.48□□□□□ -0.25
CAPN3-215ENST00000565559 TRPV6Q9H1D0 765 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms