RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 LAMA4Q16363 1823 aa28.13■■■□□ 2.09
RAB40C-209ENST00000565511 MYADML2A6NDP7 307 aa28.12■■■□□ 2.09
RAB40C-209ENST00000565511 HAND2P61296 217 aa28.12■■■□□ 2.09
RAB40C-209ENST00000565511 CNTN2Q02246 1040 aa28.12■■■□□ 2.09
RAB40C-209ENST00000565511 Q7L0L9 218 aa28.12■■■□□ 2.09
RAB40C-209ENST00000565511 MSL3Q8N5Y2 521 aaKnown RBP28.12■■■□□ 2.09
RAB40C-209ENST00000565511 CHST13Q8NET6 341 aa28.12■■■□□ 2.09
RAB40C-209ENST00000565511 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.12■■■□□ 2.09
RAB40C-209ENST00000565511 ZHX1Q9UKY1 873 aaPredicted RBP28.12■■■□□ 2.09
RAB40C-209ENST00000565511 DDX49Q9Y6V7 483 aaKnown RBP28.12■■■□□ 2.09
RAB40C-209ENST00000565511 TRIM6-TRIM34B2RNG4 842 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 ZNF467Q7Z7K2 595 aaPredicted RBP28.11■■■□□ 2.09
RAB40C-209ENST00000565511 FAM160B2Q86V87 743 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 TBC1D10CQ8IV04 446 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 ANKRD35Q8N283 1001 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 RILPL2Q969X0 211 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 KATNBL1Q9H079 304 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 RNF146Q9NTX7 359 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 CCDC171Q6TFL3 1326 aa28.11■■■□□ 2.09
RAB40C-209ENST00000565511 IKQ13123 557 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-209ENST00000565511 RRP12Q5JTH9 1297 aaKnown RBP28.1■■■□□ 2.09
RAB40C-209ENST00000565511 TTBK2Q6IQ55 1244 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 RCSD1Q6JBY9 416 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 CCDC174Q6PII3 467 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 CHD1LQ86WJ1 897 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 A1CFQ9NQ94 594 aaKnown RBP28.1■■■□□ 2.09
RAB40C-209ENST00000565511 PRDM5Q9NQX1 630 aaPredicted RBP28.1■■■□□ 2.09
RAB40C-209ENST00000565511 FBXO40Q9UH90 709 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 PRR12Q9ULL5 1215 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 ASTN1O14525 1302 aa28.1■■■□□ 2.09
RAB40C-209ENST00000565511 A0A1W2PQ45 241 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-209ENST00000565511 A0A1W2PQY0 241 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 TRIM43BA6NCK2 446 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 PLA2G6O60733 806 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 NUCB1Q02818 461 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 TLE2Q04725 743 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 ARMCX2Q7L311 632 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 CHURC1Q8WUH1 139 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 TRIM43Q96BQ3 446 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-209ENST00000565511 RWDD1Q9H446 243 aaPredicted RBP28.09■■■□□ 2.09
RAB40C-209ENST00000565511 ACAD9Q9H845 621 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 ZMYM6O95789 1325 aa28.09■■■□□ 2.09
RAB40C-209ENST00000565511 SOWAHBA6NEL2 793 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 AAMPQ13685 434 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 ACVR2BQ13705 512 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 MUM1L1Q5H9M0 696 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 C1orf53Q5VUE5 145 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 RNF180Q86T96 592 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 FAM133AQ8N9E0 248 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 KLHDC9Q8NEP7 349 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 TOMM22Q9NS69 142 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 FAM184BQ9ULE4 1060 aa28.08■■■□□ 2.09
RAB40C-209ENST00000565511 SDSP20132 328 aa28.07■■■□□ 2.08
RAB40C-209ENST00000565511 ITGB8P26012 769 aa28.07■■■□□ 2.08
RAB40C-209ENST00000565511 CCSAPQ6IQ19 270 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-209ENST00000565511 CCDC144CPQ8IYA2 1237 aa28.07■■■□□ 2.08
RAB40C-209ENST00000565511 LBHD1Q9BQE6 289 aaPredicted RBP28.07■■■□□ 2.08
RAB40C-209ENST00000565511 TMEM47Q9BQJ4 181 aa28.07■■■□□ 2.08
RAB40C-209ENST00000565511 COL6A3P12111 3177 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 FDX1P10109 184 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 ALAS1P13196 640 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 PTGS1P23219 599 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 SLC16A2P36021 539 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 CCDC96Q2M329 555 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 PPP4R3BQ5MIZ7 849 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 BADQ92934 168 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 TRERF1Q96PN7 1200 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 OSBPL3Q9H4L5 887 aa28.06■■■□□ 2.08
RAB40C-209ENST00000565511 LAMA2P24043 3122 aaKnown RBP28.05■■■□□ 2.08
RAB40C-209ENST00000565511 NEDD4P46934 1319 aa28.05■■■□□ 2.08
RAB40C-209ENST00000565511 CCDC144BQ3MJ40 725 aa28.05■■■□□ 2.08
RAB40C-209ENST00000565511 C9orf50Q5SZB4 431 aa28.05■■■□□ 2.08
RAB40C-209ENST00000565511 FRMPD2Q68DX3 1309 aaPredicted RBP28.05■■■□□ 2.08
RAB40C-209ENST00000565511 DCAF4Q8WV16 495 aa28.05■■■□□ 2.08
RAB40C-209ENST00000565511 PRKAG2Q9UGJ0 569 aa28.05■■■□□ 2.08
RAB40C-209ENST00000565511 POTEB2H3BUK9 544 aa28.04■■■□□ 2.08
RAB40C-209ENST00000565511 ACLYP53396 1101 aa28.04■■■□□ 2.08
RAB40C-209ENST00000565511 TICAM2Q86XR7 235 aa28.04■■■□□ 2.08
RAB40C-209ENST00000565511 DEFB123Q8N688 67 aa28.04■■■□□ 2.08
RAB40C-209ENST00000565511 PURBQ96QR8 312 aaKnown RBP28.04■■■□□ 2.08
RAB40C-209ENST00000565511 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.03■■■□□ 2.08
RAB40C-209ENST00000565511 CTAGE5O15320 804 aa28.03■■■□□ 2.08
RAB40C-209ENST00000565511 DUSP11O75319 330 aaKnown RBP28.03■■■□□ 2.08
RAB40C-209ENST00000565511 TOP1P11387 765 aaKnown RBP28.03■■■□□ 2.08
RAB40C-209ENST00000565511 KCNA10Q16322 511 aa28.03■■■□□ 2.08
RAB40C-209ENST00000565511 GPR153Q6NV75 609 aa28.03■■■□□ 2.08
RAB40C-209ENST00000565511 UPF3AQ9H1J1 476 aaKnown RBP28.03■■■□□ 2.08
RAB40C-209ENST00000565511 RANBP17Q9H2T7 1088 aaKnown RBP28.03■■■□□ 2.08
RAB40C-209ENST00000565511 ABHD16BQ9H3Z7 469 aa28.03■■■□□ 2.08
RAB40C-209ENST00000565511 TCP11L1Q9NUJ3 509 aa28.03■■■□□ 2.08
RAB40C-209ENST00000565511 PQBP1O60828 265 aaKnown RBP28.02■■■□□ 2.08
RAB40C-209ENST00000565511 TKFCQ3LXA3 575 aa28.02■■■□□ 2.08
RAB40C-209ENST00000565511 AKNAD1Q5T1N1 836 aa28.02■■■□□ 2.08
RAB40C-209ENST00000565511 BTNL9Q6UXG8 535 aa28.02■■■□□ 2.08
RAB40C-209ENST00000565511 TSEN34Q9BSV6 310 aaKnown RBP28.02■■■□□ 2.08
RAB40C-209ENST00000565511 GPCPD1Q9NPB8 672 aa28.02■■■□□ 2.08
RAB40C-209ENST00000565511 CCPG1Q9ULG6 757 aa28.02■■■□□ 2.08
RAB40C-209ENST00000565511 SHHQ15465 462 aa28.01■■■□□ 2.07
RAB40C-209ENST00000565511 SYDE2Q5VT97 1194 aa28.01■■■□□ 2.07
RAB40C-209ENST00000565511 IL25Q9H293 177 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms