RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 SART3Q15020 963 aaKnown RBP15.7■□□□□ 0.1
CLK3-216ENST00000564468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLK3-216ENST00000564468 PNMA1Q8ND90 353 aa15.7■□□□□ 0.1
CLK3-216ENST00000564468 CHMP4CQ96CF2 233 aa15.7■□□□□ 0.1
CLK3-216ENST00000564468 FRMPD3Q5JV73 1810 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 E7EWF7 191 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 MSCO60682 206 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 COBLO75128 1261 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 ZNF543Q08ER8 600 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 TRIM32Q13049 653 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 IFIT1BQ5T764 474 aaKnown RBP15.69■□□□□ 0.1
CLK3-216ENST00000564468 SYDE2Q5VT97 1194 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 SKAP1Q86WV1 359 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 ENAHQ8N8S7 591 aaPredicted RBP15.69■□□□□ 0.1
CLK3-216ENST00000564468 ANKLE1Q8NAG6 615 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 LSG1Q9H089 658 aaKnown RBP15.69■□□□□ 0.1
CLK3-216ENST00000564468 CRISPLD2Q9H0B8 497 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 GPCPD1Q9NPB8 672 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 ANO2Q9NQ90 1003 aa15.69■□□□□ 0.1
CLK3-216ENST00000564468 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
CLK3-216ENST00000564468 MCM3APO60318 1980 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 DLL1O00548 723 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 ASPRV1Q53RT3 343 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 RNF20Q5VTR2 975 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 ANKRD35Q8N283 1001 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 SHISA4Q96DD7 197 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 MAML3Q96JK9 1138 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 RANBP17Q9H2T7 1088 aaKnown RBP15.68■□□□□ 0.1
CLK3-216ENST00000564468 ACAD9Q9H845 621 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 FLRT1Q9NZU1 646 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 RIPK3Q9Y572 518 aa15.68■□□□□ 0.1
CLK3-216ENST00000564468 A0A1W2PPC1 479 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 ZNF792Q3KQV3 632 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 TTBK2Q6IQ55 1244 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 CCDC174Q6PII3 467 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 MSL3Q8N5Y2 521 aaKnown RBP15.67■□□□□ 0.1
CLK3-216ENST00000564468 NRBP1Q9UHY1 535 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 ZNF536O15090 1300 aa15.67■□□□□ 0.1
CLK3-216ENST00000564468 IFIT3O14879 490 aaKnown RBP15.66■□□□□ 0.1
CLK3-216ENST00000564468 FARP2O94887 1054 aaPredicted RBP15.66■□□□□ 0.1
CLK3-216ENST00000564468 ICAM1P05362 532 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 PGK2P07205 417 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 ALAS1P13196 640 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 CNGA1P29973 690 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 CCND3P30281 292 aaPredicted RBP15.66■□□□□ 0.1
CLK3-216ENST00000564468 CYP2C19P33261 490 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 SLC16A2P36021 539 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 SEC23AQ15436 765 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 CYB5R4Q7L1T6 521 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 RASGRP2Q7LDG7 609 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 TRERF1Q96PN7 1200 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 TINF2Q9BSI4 451 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 MTA3Q9BTC8 594 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 HOMER2Q9NSB8 354 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 PFASO15067 1338 aa15.66■□□□□ 0.1
CLK3-216ENST00000564468 DNAJC25-GNG10A0A024R161 153 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 EVI5O60447 810 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 IGHA2P01877 340 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 PARP1P09874 1014 aaKnown RBP15.65■□□□□ 0.1
CLK3-216ENST00000564468 WTAPQ15007 396 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 NECTIN1Q15223 517 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 UBE2Q1Q7Z7E8 422 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 ZNF467Q7Z7K2 595 aaPredicted RBP15.65■□□□□ 0.1
CLK3-216ENST00000564468 OGDHLQ9ULD0 1010 aa15.65■□□□□ 0.1
CLK3-216ENST00000564468 COL6A3P12111 3177 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 LAMA3Q16787 3333 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 SLC27A2O14975 620 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 CYBAP13498 195 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 MCM5P33992 734 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 NECAB2Q7Z6G3 386 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 TMTC2Q8N394 836 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 DDX20Q9UHI6 824 aaKnown RBP15.64■□□□□ 0.09
CLK3-216ENST00000564468 BAZ2BQ9UIF8 2168 aaKnown RBP15.64■□□□□ 0.09
CLK3-216ENST00000564468 CNPY2Q9Y2B0 182 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 WDR19Q8NEZ3 1342 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 SYNGAP1Q96PV0 1343 aa15.64■□□□□ 0.09
CLK3-216ENST00000564468 POTEB2H3BUK9 544 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 SEPT4O43236 478 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 GOLGA8HP0CJ92 632 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 SNAP25P60880 206 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 TMEM67Q5HYA8 995 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 LHX8Q68G74 356 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 MAMDC4Q6UXC1 1216 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 STOX1Q6ZVD7 989 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 CATIPQ7Z7H3 387 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 MB21D2Q8IYB1 491 aaPredicted RBP15.63■□□□□ 0.09
CLK3-216ENST00000564468 TMEM87BQ96K49 555 aa15.63■□□□□ 0.09
CLK3-216ENST00000564468 DHX16O60231 1041 aaKnown RBP15.62■□□□□ 0.09
CLK3-216ENST00000564468 UBA5Q9GZZ9 404 aa15.62■□□□□ 0.09
CLK3-216ENST00000564468 MAF1Q9H063 256 aa15.62■□□□□ 0.09
CLK3-216ENST00000564468 PRO3102Q9H379 93 aa15.62■□□□□ 0.09
CLK3-216ENST00000564468 A1CFQ9NQ94 594 aaKnown RBP15.62■□□□□ 0.09
CLK3-216ENST00000564468 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
CLK3-216ENST00000564468 CUL9Q8IWT3 2517 aa15.62■□□□□ 0.09
CLK3-216ENST00000564468 REC8O95072 547 aa15.61■□□□□ 0.09
CLK3-216ENST00000564468 TRAF1Q13077 416 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms