RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 CHMLP26374 656 aa29.76■■■□□ 2.35
AC009041.3-201ENST00000564390 GJC2Q5T442 439 aaPredicted RBP29.76■■■□□ 2.35
AC009041.3-201ENST00000564390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.76■■■□□ 2.35
AC009041.3-201ENST00000564390 ZMYND8Q9ULU4 1186 aaPredicted RBP29.76■■■□□ 2.35
AC009041.3-201ENST00000564390 PDHBP11177 359 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 ALAS1P13196 640 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 LRRC26Q2I0M4 334 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 FGD4Q96M96 766 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 SENP6Q9GZR1 1112 aaPredicted RBP29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 ACAD9Q9H845 621 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 PCDH10Q9P2E7 1040 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 CTNNA3Q9UI47 895 aa29.75■■■□□ 2.35
AC009041.3-201ENST00000564390 DNM1LO00429 736 aa29.74■■■□□ 2.35
AC009041.3-201ENST00000564390 SYDE2Q5VT97 1194 aa29.74■■■□□ 2.35
AC009041.3-201ENST00000564390 LENG1Q96BZ8 264 aaPredicted RBP29.74■■■□□ 2.35
AC009041.3-201ENST00000564390 TTC14Q96N46 770 aa29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 TRERF1Q96PN7 1200 aa29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 A1CFQ9NQ94 594 aaKnown RBP29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 NRBP1Q9UHY1 535 aa29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 CCPG1Q9ULG6 757 aa29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 CNPY2Q9Y2B0 182 aa29.73■■■□□ 2.35
AC009041.3-201ENST00000564390 ZNF865P0CJ78 1059 aaPredicted RBP29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 SYN1P17600 705 aa29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 CNTN2Q02246 1040 aa29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 MUM1L1Q5H9M0 696 aa29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 BTNL9Q6UXG8 535 aa29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 RUFY2Q8WXA3 655 aa29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 RANBP17Q9H2T7 1088 aaKnown RBP29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 RBM27Q9P2N5 1060 aaKnown RBP29.72■■■□□ 2.35
AC009041.3-201ENST00000564390 SYNGAP1Q96PV0 1343 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 KBTBD13C9JR72 458 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 SNAI1O95863 264 aaPredicted RBP29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 ATN1P54259 1190 aaPredicted RBP29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 PTH1RQ03431 593 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 ZNF543Q08ER8 600 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 IQCA1Q86XH1 822 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 ARRDC4Q8NCT1 418 aa29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 ZHX1Q9UKY1 873 aaPredicted RBP29.71■■■□□ 2.35
AC009041.3-201ENST00000564390 MCM3APO60318 1980 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 RARBP10826 455 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 TKFCQ3LXA3 575 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 MAMDC4Q6UXC1 1216 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 ZNF467Q7Z7K2 595 aaPredicted RBP29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 SKAP1Q86WV1 359 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 MSL3Q8N5Y2 521 aaKnown RBP29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 XPNPEP3Q9NQH7 507 aa29.7■■■□□ 2.35
AC009041.3-201ENST00000564390 POTEB2H3BUK9 544 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 ICAM1P05362 532 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 GOLGA8HP0CJ92 632 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 SNHG28P0DPA3 235 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 AKR1A1P14550 325 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 LRRC41Q15345 812 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 DGKHQ86XP1 1220 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 ENAHQ8N8S7 591 aaPredicted RBP29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 ZSCAN10Q96SZ4 725 aaPredicted RBP29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 ZSWIM5Q9P217 1185 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 SMCHD1A6NHR9 2005 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 TNKSO95271 1327 aa29.69■■■□□ 2.34
AC009041.3-201ENST00000564390 PGK1P00558 417 aa29.68■■■□□ 2.34
AC009041.3-201ENST00000564390 PNMA1Q8ND90 353 aa29.68■■■□□ 2.34
AC009041.3-201ENST00000564390 KRT23Q9C075 422 aa29.68■■■□□ 2.34
AC009041.3-201ENST00000564390 PRO3102Q9H379 93 aa29.68■■■□□ 2.34
AC009041.3-201ENST00000564390 LRRC37A2A6NM11 1700 aa29.68■■■□□ 2.34
AC009041.3-201ENST00000564390 LCTP09848 1927 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 ARMCX2Q7L311 632 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 FAM133AQ8N9E0 248 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 CPVLQ9H3G5 476 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 KAT14Q9H8E8 782 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 CNNM2Q9H8M5 875 aa29.67■■■□□ 2.34
AC009041.3-201ENST00000564390 SOWAHBA6NEL2 793 aa29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 SGSM2O43147 1006 aa29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 NT5C2P49902 561 aa29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 NSMFQ6X4W1 530 aa29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 CCDC144CPQ8IYA2 1237 aa29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 DDX49Q9Y6V7 483 aaKnown RBP29.66■■■□□ 2.34
AC009041.3-201ENST00000564390 ADCYAP1R1P41586 468 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 FXR1P51114 621 aaKnown RBP eCLIP29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 CCDC178Q5BJE1 867 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 FERMT2Q96AC1 680 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 UBAC1Q9BSL1 405 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 CYP39A1Q9NYL5 469 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 TAF6LQ9Y6J9 622 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 ASTN1O14525 1302 aa29.65■■■□□ 2.34
AC009041.3-201ENST00000564390 CYP21A2P08686 494 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 ACVR2BQ13705 512 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 CYB5R4Q7L1T6 521 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 UBA5Q9GZZ9 404 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 FAM184BQ9ULE4 1060 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 DNAH12Q6ZR08 3092 aa29.64■■■□□ 2.34
AC009041.3-201ENST00000564390 NFIBO00712 420 aa29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 ADCY6O43306 1168 aa29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 RTP1P59025 263 aa29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 GPATCH4Q5T3I0 446 aaKnown RBP29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 ANKS1AQ92625 1134 aa29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 PURBQ96QR8 312 aaKnown RBP29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 U3KPZ7 1027 aaPredicted RBP29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 SYNRGQ9UMZ2 1314 aa29.63■■■□□ 2.33
AC009041.3-201ENST00000564390 ABHD16BQ9H3Z7 469 aa29.62■■■□□ 2.33
AC009041.3-201ENST00000564390 ATP11BQ9Y2G3 1177 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms