RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-231ENST00000564288 SYCP2LQ5T4T6 812 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 KLC3Q6P597 504 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ATP1A2P50993 1020 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 DTHD1Q6ZMT9 781 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PZPP20742 1482 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ABCA8O94911 1581 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 HMOX1P09601 288 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 MAB21L3Q8N8X9 362 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ATXN2Q99700 1313 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 GOLGA8AA7E2F4 631 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 MARCKSP29966 332 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 PSMC4P43686 418 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ANKRD20A4Q4UJ75 823 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ANKRD20A8PQ5CZ79 823 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ANKRD20A2Q5SQ80 823 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ANKRD20A1Q5TYW2 823 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 RBM43Q6ZSC3 357 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 DDX25Q9UHL0 483 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 PSMD14O00487 310 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 KDM1AO60341 852 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CALM1P0DP23 149 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CALM2P0DP24 149 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CALM3P0DP25 149 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 MYO1EQ12965 1108 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 EZH1Q92800 747 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 IFIH1Q9BYX4 1025 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 VPS16Q9H269 839 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 DCLRE1BQ9H816 532 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CTNNAL1Q9UBT7 734 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 TET3O43151 1660 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 LMTK2Q8IWU2 1503 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 UBE4BO95155 1302 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 NSFL1CQ9UNZ2 370 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 KRT4P19013 534 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 RPS6KA3P51812 740 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 NDUFA8P51970 172 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CCDC43Q96MW1 224 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 ANO5Q75V66 913 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 B4GALNT2Q8NHY0 566 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PHF23Q9BUL5 403 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 CAV1Q03135 178 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 LINC00301Q8NCQ3 95 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 YIPF3Q9GZM5 350 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 DBF4Q9UBU7 674 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 ZNF662Q6ZS27 426 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 C8orf58Q8NAV2 365 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 NLRP7Q8WX94 980 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CUEDC2Q9H467 287 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 VCPKMTQ9H867 229 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 NUP107P57740 925 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 SOGA3Q5TF21 947 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 KDM7AQ6ZMT4 941 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PIGOQ8TEQ8 1089 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CALML4Q96GE6 196 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 FTOQ9C0B1 505 aaKnown RBP eCLIP4.66□□□□□ -1.666e-7■■□□□ 12.1
MACF1-231ENST00000564288 SLC24A3Q9HC58 644 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ZC4H2Q9NQZ6 224 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PXDNLA1KZ92 1463 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PPP2R2AP63151 447 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 DAB2IPQ5VWQ8 1189 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 DNAJC9Q8WXX5 260 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 KIFAP3Q92845 792 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 MBIPQ9NS73 344 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 RWDD2AQ9UIY3 292 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 UGGT1Q9NYU2 1555 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CAMSAP1Q5T5Y3 1602 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 CCDC22O60826 627 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 SERPINB4P48594 390 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 ATXN10Q9UBB4 475 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 NOVA2Q9UNW9 492 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 DRAXINQ8NBI3 349 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 DDHD1Q8NEL9 900 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 TYW1Q9NV66 732 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 USP32Q8NFA0 1604 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 GRID2IPA4D2P6 1211 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 WLSQ5T9L3 541 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PRG4Q92954 1404 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 PHBP35232 272 aa4.66□□□□□ -1.66
MACF1-231ENST00000564288 PRPF4BQ13523 1007 aaKnown RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 MMADHCQ9H3L0 296 aaPredicted RBP4.66□□□□□ -1.66
MACF1-231ENST00000564288 FESP07332 822 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 CWF19L1Q69YN2 538 aaKnown RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 COL23A1Q86Y22 540 aaPredicted RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 SLC35F6Q8N357 371 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 PPP1R14CQ8TAE6 165 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 POP5Q969H6 163 aaKnown RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 NAF1Q96HR8 494 aaKnown RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 AMFRQ9UKV5 643 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 WDR37Q9Y2I8 494 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 SH3BP1Q9Y3L3 701 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 ANKRD65E5RJM6 399 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 NDUFA10O95299 355 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 EPS15L1Q9UBC2 864 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 PTCH1Q13635 1447 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 PAX7P23759 505 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 PDE1BQ01064 536 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 LACTB2Q53H82 288 aaPredicted RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 ATP2B2Q01814 1243 aa4.65□□□□□ -1.66
MACF1-231ENST00000564288 DDX20Q9UHI6 824 aaKnown RBP4.65□□□□□ -1.66
MACF1-231ENST00000564288 OVOS2A0A0G2JMS6 1433 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms