RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 B4E1Z4 1266 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 SLC34A2O95436 690 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 PDHBP11177 359 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 CHMLP26374 656 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 GJC2Q5T442 439 aaPredicted RBP23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 FGD4Q96M96 766 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 NRBP1Q9UHY1 535 aa23.5■■□□□ 1.35
SHCBP1-203ENST00000564272 DNM1LO00429 736 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 ALAS1P13196 640 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 LRRC26Q2I0M4 334 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 SYDE2Q5VT97 1194 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 BTNL9Q6UXG8 535 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 TTC14Q96N46 770 aa23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 ZMYND8Q9ULU4 1186 aaPredicted RBP23.49■■□□□ 1.35
SHCBP1-203ENST00000564272 MYCNP04198 464 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 ZNF865P0CJ78 1059 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 RUFY2Q8WXA3 655 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 LENG1Q96BZ8 264 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 TRERF1Q96PN7 1200 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 SENP6Q9GZR1 1112 aaPredicted RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 RANBP17Q9H2T7 1088 aaKnown RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 A1CFQ9NQ94 594 aaKnown RBP23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 CCPG1Q9ULG6 757 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 CNPY2Q9Y2B0 182 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 SYNGAP1Q96PV0 1343 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 SMCHD1A6NHR9 2005 aa23.48■■□□□ 1.35
SHCBP1-203ENST00000564272 MCM3APO60318 1980 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 SNAI1O95863 264 aaPredicted RBP23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 CNTN2Q02246 1040 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 PTH1RQ03431 593 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 ZNF543Q08ER8 600 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 TKFCQ3LXA3 575 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 MUM1L1Q5H9M0 696 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 MAMDC4Q6UXC1 1216 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 IQCA1Q86XH1 822 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 MSL3Q8N5Y2 521 aaKnown RBP23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 PCDH10Q9P2E7 1040 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 RBM27Q9P2N5 1060 aaKnown RBP23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 TRIOBPQ9H2D6 2365 aa23.47■■□□□ 1.35
SHCBP1-203ENST00000564272 ICAM1P05362 532 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 SNHG28P0DPA3 235 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 SYN1P17600 705 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 NT5C2P49902 561 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 ZNF467Q7Z7K2 595 aaPredicted RBP23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 DGKHQ86XP1 1220 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 ARRDC4Q8NCT1 418 aa23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 ZSCAN10Q96SZ4 725 aaPredicted RBP23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 ZHX1Q9UKY1 873 aaPredicted RBP23.46■■□□□ 1.35
SHCBP1-203ENST00000564272 KBTBD13C9JR72 458 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 POTEB2H3BUK9 544 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 RARBP10826 455 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 AKR1A1P14550 325 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 ATN1P54259 1190 aaPredicted RBP23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 LRRC41Q15345 812 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 ENAHQ8N8S7 591 aaPredicted RBP23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 KRT23Q9C075 422 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 PRO3102Q9H379 93 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 XPNPEP3Q9NQH7 507 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 ZSWIM5Q9P217 1185 aa23.45■■□□□ 1.34
SHCBP1-203ENST00000564272 TNKSO95271 1327 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 SGSM2O43147 1006 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 GOLGA8HP0CJ92 632 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 CCDC178Q5BJE1 867 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 ARMCX2Q7L311 632 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 SKAP1Q86WV1 359 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 FAM133AQ8N9E0 248 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 PNMA1Q8ND90 353 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 KAT14Q9H8E8 782 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 CNNM2Q9H8M5 875 aa23.44■■□□□ 1.34
SHCBP1-203ENST00000564272 LCTP09848 1927 aa23.43■■□□□ 1.34
SHCBP1-203ENST00000564272 PGK1P00558 417 aa23.43■■□□□ 1.34
SHCBP1-203ENST00000564272 CCDC144CPQ8IYA2 1237 aa23.43■■□□□ 1.34
SHCBP1-203ENST00000564272 CPVLQ9H3G5 476 aa23.43■■□□□ 1.34
SHCBP1-203ENST00000564272 SOWAHBA6NEL2 793 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 ACVR2BQ13705 512 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 NSMFQ6X4W1 530 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 ANKS1AQ92625 1134 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 UBAC1Q9BSL1 405 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 CYP39A1Q9NYL5 469 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 TAF6LQ9Y6J9 622 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 LRRC37A2A6NM11 1700 aa23.42■■□□□ 1.34
SHCBP1-203ENST00000564272 ASTN1O14525 1302 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 CYP21A2P08686 494 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 ADCYAP1R1P41586 468 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 FXR1P51114 621 aaKnown RBP eCLIP23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 GPATCH4Q5T3I0 446 aaKnown RBP23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 CYB5R4Q7L1T6 521 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 FERMT2Q96AC1 680 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 UBA5Q9GZZ9 404 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 FAM184BQ9ULE4 1060 aa23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 DDX49Q9Y6V7 483 aaKnown RBP23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 U3KPZ7 1027 aaPredicted RBP23.41■■□□□ 1.34
SHCBP1-203ENST00000564272 NFIBO00712 420 aa23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 ADCY6O43306 1168 aa23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 RTP1P59025 263 aa23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 CENPQQ7L2Z9 268 aaPredicted RBP23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 PURBQ96QR8 312 aaKnown RBP23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 ABHD16BQ9H3Z7 469 aa23.4■■□□□ 1.34
SHCBP1-203ENST00000564272 SYNRGQ9UMZ2 1314 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms