RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 KCNJ6P48051 423 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 DNAJC21Q5F1R6 531 aaKnown RBP13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 UPP2O95045 317 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 TFRCP02786 760 aaKnown RBP13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 CCDC17Q96LX7 622 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 TACC3Q9Y6A5 838 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 SYDE2Q5VT97 1194 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 KRT40Q6A162 431 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 PRAMEF22A3QJZ6 481 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 PPP1R2P41236 205 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 TFAMQ00059 246 aaKnown RBP13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 CCDC157Q569K6 752 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 RNF219Q5W0B1 726 aaPredicted RBP13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 EXOC8Q8IYI6 725 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 CCDC68Q9H2F9 335 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 SLC12A6Q9UHW9 1150 aa13.29□□□□□ -0.28
TUBGCP4-208ENST00000564079 KBTBD13C9JR72 458 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 PSMD6Q15008 389 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 TAF1CQ15572 869 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 MTRQ99707 1265 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 TSGA10Q9BZW7 698 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 MKRN1Q9UHC7 482 aaKnown RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 HACL1Q9UJ83 578 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 DCLK2Q8N568 766 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 H0YCG3 227 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 ABCB4P21439 1286 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 PDXDC2PQ6P474 469 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 SERPINB13Q9UIV8 391 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 ANAPC5Q9UJX4 755 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 PPM1KQ8N3J5 372 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 NELFBQ8WX92 580 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 CFAP57Q96MR6 1250 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 MMP19Q99542 508 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 NCAPGQ9BPX3 1015 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 NLRC4Q9NPP4 1024 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 CLGNO14967 610 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 GNAT1P11488 350 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 ATRIPQ8WXE1 791 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 LSM14BQ9BX40 385 aaKnown RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 KMT5AQ9NQR1 393 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 HOXA13P31271 388 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 CRKP46108 304 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 PTPROQ16827 1216 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 AFAP1L2Q8N4X5 818 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 DYNLL2Q96FJ2 89 aa13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 JPH2Q9BR39 696 aaPredicted RBP13.28□□□□□ -0.28
TUBGCP4-208ENST00000564079 RHOXF2BP0C7M4 288 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 SMIM5Q71RC9 77 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 KANSL2Q9H9L4 492 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 PPP2R5AQ15172 486 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 RABGAP1Q9Y3P9 1069 aa13.27□□□□□ -0.28
TUBGCP4-208ENST00000564079 CCDC160A6NGH7 325 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 CHL1O00533 1208 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 PDE8BO95263 885 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 TYRO3Q06418 890 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 NEK8Q86SG6 692 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 RAVER2Q9HCJ3 691 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 PGBD3Q8N328 593 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 URGCPQ8TCY9 931 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 PSMB7Q99436 277 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 A6NJR5 290 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 FAM196BA6NMK8 535 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 GH2P01242 217 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 POLR2BP30876 1174 aaKnown RBP13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 SLC7A5P2Q9GIP4 190 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 COA1Q9GZY4 146 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 CTTNBP2Q8WZ74 1663 aa13.27□□□□□ -0.29
TUBGCP4-208ENST00000564079 KLHL30Q0D2K2 578 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 PROSER3Q2NL68 480 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 KAZNQ674X7 775 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 MYLK4Q86YV6 388 aaPredicted RBP13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 CCDC26Q8TAB7 109 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 RNF139Q8WU17 664 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 NUP160Q12769 1436 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 WDR46O15213 610 aaKnown RBP13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 MCM6Q14566 821 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 SUSD4Q5VX71 490 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 MTIF3Q9H2K0 278 aaKnown RBP13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 HEXIM1O94992 359 aaKnown RBP13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 IFNB1P01574 187 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 RNF207Q6ZRF8 634 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 IGSF22Q8N9C0 903 aa13.26□□□□□ -0.29
TUBGCP4-208ENST00000564079 U2AF1L4Q8WU68 220 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms