RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC144BQ3MJ40 725 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 TNNI3KQ59H18 835 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 TMEM67Q5HYA8 995 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 GNASQ5JWF2 1037 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 FAM178BQ8IXR5 827 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 PPP1R9AQ9ULJ8 1098 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 RIPK3Q9Y572 518 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 FPGT-TNNI3KV9GXZ4 949 aa9.41□□□□□ -0.9
HERPUD1-206ENST00000563343 C5orf42Q9H799 3197 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 MPHOSPH10O00566 681 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 B4GALT4O60513 344 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 AKR1B1P15121 316 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 COPB2P35606 906 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 BEX3Q00994 111 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 RPUSD2Q8IZ73 545 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 MAGEB6Q8N7X4 407 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 VTI1AQ96AJ9 217 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 SCLYQ96I15 445 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 TRPV6Q9H1D0 765 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 KCNH6Q9H252 994 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 ABHD16BQ9H3Z7 469 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 SMC4Q9NTJ3 1288 aa9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 ZBTB47Q9UFB7 747 aaPredicted RBP9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 NOB1Q9ULX3 412 aaKnown RBP9.4□□□□□ -0.9
HERPUD1-206ENST00000563343 NLRC5Q86WI3 1866 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 CYP2D6P10635 497 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ICA1Q05084 483 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ITGA7Q13683 1181 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 CCDC158Q5M9N0 1113 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 CXCL17Q6UXB2 119 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 GJD3Q8N144 294 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ARNTL2Q8WYA1 636 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ANKS1AQ92625 1134 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ANTXR1Q9H6X2 564 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 TLR7Q9NYK1 1049 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 DBNLQ9UJU6 430 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 GNEQ9Y223 722 aaKnown RBP9.39□□□□□ -0.91
HERPUD1-206ENST00000563343 POTEB3A0JP26 581 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 ZBBXA8MT70 800 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 IDH1O75874 414 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 PFKMP08237 780 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 GNAI3P08754 354 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 IL9P15248 144 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 PTGS1P23219 599 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 G3BP1Q13283 466 aaKnown RBP eCLIP9.38□□□□□ -0.916e-10■□□□□ 10.8
HERPUD1-206ENST00000563343 POTEBQ6S5H4 581 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 ARMCX2Q7L311 632 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 SLC9A7Q96T83 725 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 API5Q9BZZ5 524 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 SH2D4AQ9H788 454 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 SPC25Q9HBM1 224 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 LMCD1Q9NZU5 365 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 PLXNA3P51805 1871 aa9.38□□□□□ -0.91
HERPUD1-206ENST00000563343 TECTAO75443 2155 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 E9PSI1 815 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 HAX1O00165 279 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 ATP2A1O14983 1001 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 CABYRO75952 493 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 LEXMQ3ZCV2 418 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 FAM83BQ5T0W9 1011 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 SNRNP48Q6IEG0 339 aaKnown RBP9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 TMED8Q6PL24 325 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 CCDC144CPQ8IYA2 1237 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 PHOSPHO2Q8TCD6 241 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 DYNLL2Q96FJ2 89 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 TEX13BQ9BXU2 312 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 SEZ6LQ9BYH1 1024 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 UBE2ZQ9H832 354 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 DCP1AQ9NPI6 582 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 MCM9Q9NXL9 1143 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 SWAP70Q9UH65 585 aa9.37□□□□□ -0.91
HERPUD1-206ENST00000563343 LCHNA4D1U4 455 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 EEF2P13639 858 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 ALADP13716 330 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 PSMC6P62333 389 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 TNFAIP2Q03169 654 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 TMEM63BQ5T3F8 832 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 TRMT2AQ8IZ69 625 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 SDR42E1Q8WUS8 393 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 UIMC1Q96RL1 719 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 ALDH8A1Q9H2A2 487 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 SPTBN4Q9H254 2564 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 CACNA1AO00555 2505 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 MICAL3Q7RTP6 2002 aa9.36□□□□□ -0.91
HERPUD1-206ENST00000563343 COL4A6Q14031 1691 aa9.36□□□□□ -0.91
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