RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 DIS3Q9Y2L1 958 aaKnown RBP21.88■■□□□ 1.09
CDH11-206ENST00000562998 CTDP1Q9Y5B0 961 aaPredicted RBP21.88■■□□□ 1.09
CDH11-206ENST00000562998 SMCHD1A6NHR9 2005 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 IFIT3O14879 490 aaKnown RBP21.87■■□□□ 1.09
CDH11-206ENST00000562998 ICAM1P05362 532 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 GOLGA8HP0CJ92 632 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 SNAP25P60880 206 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 KCTD2Q14681 263 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 TKFCQ3LXA3 575 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 ASPRV1Q53RT3 343 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 CHST3Q7LGC8 479 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 RASEFQ8IZ41 740 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDH11-206ENST00000562998 FBXO40Q9UH90 709 aa21.87■■□□□ 1.09
CDH11-206ENST00000562998 PLXNA1Q9UIW2 1896 aa21.86■■□□□ 1.09
CDH11-206ENST00000562998 PRKAR2AP13861 404 aaKnown RBP21.86■■□□□ 1.09
CDH11-206ENST00000562998 RNF20Q5VTR2 975 aa21.86■■□□□ 1.09
CDH11-206ENST00000562998 MAML3Q96JK9 1138 aa21.86■■□□□ 1.09
CDH11-206ENST00000562998 CRISPLD2Q9H0B8 497 aa21.86■■□□□ 1.09
CDH11-206ENST00000562998 SLC5A4Q9NY91 659 aa21.86■■□□□ 1.09
CDH11-206ENST00000562998 EPB41L2O43491 1005 aaKnown RBP21.85■■□□□ 1.09
CDH11-206ENST00000562998 SGPL1O95470 568 aa21.85■■□□□ 1.09
CDH11-206ENST00000562998 PGK2P07205 417 aa21.85■■□□□ 1.09
CDH11-206ENST00000562998 MCM5P33992 734 aa21.85■■□□□ 1.09
CDH11-206ENST00000562998 TROAPQ12815 778 aa21.85■■□□□ 1.09
CDH11-206ENST00000562998 SART3Q15020 963 aaKnown RBP21.85■■□□□ 1.09
CDH11-206ENST00000562998 U2AF1L4Q8WU68 220 aaKnown RBP21.85■■□□□ 1.09
CDH11-206ENST00000562998 LY9Q9HBG7 655 aa21.85■■□□□ 1.09
CDH11-206ENST00000562998 HMX1Q9NP08 348 aaPredicted RBP21.85■■□□□ 1.09
CDH11-206ENST00000562998 PALM3A6NDB9 673 aaPredicted RBP21.84■■□□□ 1.09
CDH11-206ENST00000562998 PRC1O43663 620 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 PARP1P09874 1014 aaKnown RBP21.84■■□□□ 1.09
CDH11-206ENST00000562998 CAPN2P17655 700 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 HSPA4P34932 840 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 MLLT1Q03111 559 aaPredicted RBP21.84■■□□□ 1.09
CDH11-206ENST00000562998 WTAPQ15007 396 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 TMEM67Q5HYA8 995 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 MFSD14CQ5VZR4 134 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 CCDC174Q6PII3 467 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 UBE2Q1Q7Z7E8 422 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 TMEM87BQ96K49 555 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 FGD4Q96M96 766 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 UBA5Q9GZZ9 404 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 CPVLQ9H3G5 476 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 ACAD9Q9H845 621 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 GPHNQ9NQX3 736 aaPredicted RBP21.84■■□□□ 1.09
CDH11-206ENST00000562998 RNF146Q9NTX7 359 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 MAD2L2Q9UI95 211 aa21.84■■□□□ 1.09
CDH11-206ENST00000562998 WDR19Q8NEZ3 1342 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 ERICH2A1L162 156 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 CYBAP13498 195 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 CYP2C19P33261 490 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 GRM4Q14833 912 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 ADCK5Q3MIX3 580 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 MUM1L1Q5H9M0 696 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 ADGRF4Q8IZF3 695 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 STAG2Q8N3U4 1231 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 TRPV1Q8NER1 839 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 DEFB118Q96PH6 123 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 TRERF1Q96PN7 1200 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 CCPG1Q9ULG6 757 aa21.83■■□□□ 1.09
CDH11-206ENST00000562998 SH2B2O14492 632 aaPredicted RBP21.82■■□□□ 1.08
CDH11-206ENST00000562998 REC8O95072 547 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 ALAS1P13196 640 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 CCND3P30281 292 aaPredicted RBP21.82■■□□□ 1.08
CDH11-206ENST00000562998 SLC4A3P48751 1232 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 EXOSC10Q01780 885 aaKnown RBP21.82■■□□□ 1.08
CDH11-206ENST00000562998 SLC35G1Q2M3R5 365 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 ZNF467Q7Z7K2 595 aaPredicted RBP21.82■■□□□ 1.08
CDH11-206ENST00000562998 MTMR8Q96EF0 704 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 NEK1Q96PY6 1258 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
CDH11-206ENST00000562998 HOMER2Q9NSB8 354 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 PNMA2Q9UL42 364 aa21.82■■□□□ 1.08
CDH11-206ENST00000562998 TAL1P17542 331 aaPredicted RBP21.81■■□□□ 1.08
CDH11-206ENST00000562998 LIFRP42702 1097 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 LHX8Q68G74 356 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 MAMDC4Q6UXC1 1216 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 MSL3Q8N5Y2 521 aaKnown RBP21.81■■□□□ 1.08
CDH11-206ENST00000562998 FAM133AQ8N9E0 248 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 DDX11Q96FC9 970 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 MAP3K14Q99558 947 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 TINF2Q9BSI4 451 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 JMJD4Q9H9V9 463 aa21.81■■□□□ 1.08
CDH11-206ENST00000562998 KLRF2D3W0D1 207 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 KRT32Q14532 448 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 ANKRD35Q8N283 1001 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 TMTC2Q8N394 836 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 CLEC4DQ8WXI8 215 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 NRBP1Q9UHY1 535 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 OGDHLQ9ULD0 1010 aa21.8■■□□□ 1.08
CDH11-206ENST00000562998 LCTP09848 1927 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 SGMS1Q86VZ5 419 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 RIOX1Q9H6W3 641 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 CYP39A1Q9NYL5 469 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 SNX14Q9Y5W7 946 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 PFASO15067 1338 aa21.79■■□□□ 1.08
CDH11-206ENST00000562998 FRMPD3Q5JV73 1810 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 DDAH1O94760 285 aa21.78■■□□□ 1.08
CDH11-206ENST00000562998 MNX1P50219 401 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms