RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 SEPT4O43236 478 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 SNAI1O95863 264 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 CYP21A2P08686 494 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 ZNF865P0CJ78 1059 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 CAPN2P17655 700 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 CNTN2Q02246 1040 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 IMMTQ16891 758 aaKnown RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 BTNL9Q6UXG8 535 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 CYB5R4Q7L1T6 521 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 LENG1Q96BZ8 264 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 TTC14Q96N46 770 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 RANBP17Q9H2T7 1088 aaKnown RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 SLC5A4Q9NY91 659 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 COLQQ9Y215 455 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 DIS3Q9Y2L1 958 aaKnown RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 CTDP1Q9Y5B0 961 aaPredicted RBP13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 ASTN1O14525 1302 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 RAD50Q92878 1312 aa13.06□□□□□ -0.32
LPCAT4-202ENST00000562404 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 FDX1P10109 184 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 ALAS1P13196 640 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 LRRC26Q2I0M4 334 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 GJC2Q5T442 439 aaPredicted RBP13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 STOX1Q6ZVD7 989 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 ENAHQ8N8S7 591 aaPredicted RBP13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 DDX11Q96FC9 970 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 PURBQ96QR8 312 aaKnown RBP13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 A1CFQ9NQ94 594 aaKnown RBP13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
LPCAT4-202ENST00000562404 SZT2Q5T011 3432 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 SOWAHBA6NEL2 793 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 ADCY6O43306 1168 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 EVI5O60447 810 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 IRX5P78411 483 aaPredicted RBP13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 MAMDC4Q6UXC1 1216 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 DGKHQ86XP1 1220 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 ANKRD35Q8N283 1001 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 FAM133AQ8N9E0 248 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 ANKS1AQ92625 1134 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 TRERF1Q96PN7 1200 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 ZSCAN10Q96SZ4 725 aaPredicted RBP13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 TNKSO95271 1327 aa13.04□□□□□ -0.32
LPCAT4-202ENST00000562404 MSCO60682 206 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 SEC23AQ15436 765 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 HABP4Q5JVS0 413 aaKnown RBP13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 MAP4K1Q92918 833 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 SENP6Q9GZR1 1112 aaPredicted RBP13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 FBXO40Q9UH90 709 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 CCPG1Q9ULG6 757 aa13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
LPCAT4-202ENST00000562404 DNM1LO00429 736 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 NFIBO00712 420 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 PGK1P00558 417 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 ICAM1P05362 532 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 SYN1P17600 705 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 PTGS1P23219 599 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 LRRC41Q15345 812 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 ZNF467Q7Z7K2 595 aaPredicted RBP13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 IQCA1Q86XH1 822 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 CCDC144CPQ8IYA2 1237 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 KRT23Q9C075 422 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 RBM27Q9P2N5 1060 aaKnown RBP13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 NRBP1Q9UHY1 535 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 SYNGAP1Q96PV0 1343 aa13.02□□□□□ -0.33
LPCAT4-202ENST00000562404 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 E7EWF7 191 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 POTEB2H3BUK9 544 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 ANTXR2P58335 489 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 TKFCQ3LXA3 575 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 TMEM63BQ5T3F8 832 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 ARMCX2Q7L311 632 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 STAG2Q8N3U4 1231 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 MSL3Q8N5Y2 521 aaKnown RBP13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 CLEC4DQ8WXI8 215 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 LSG1Q9H089 658 aaKnown RBP13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 ZHX1Q9UKY1 873 aaPredicted RBP13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 RBM8AQ9Y5S9 174 aaKnown RBP13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 NR2E3Q9Y5X4 410 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 LTBP2Q14767 1821 aa13.01□□□□□ -0.33
LPCAT4-202ENST00000562404 C11orf97A0A1B0GVM6 126 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms