RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 SNAP25P60880 206 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 PPP4R3BQ5MIZ7 849 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 RCSD1Q6JBY9 416 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 ANKRD35Q8N283 1001 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 CHURC1Q8WUH1 139 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 STAG1Q8WVM7 1258 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 GMCL1Q96IK5 515 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 GDF15Q99988 308 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 HOMER2Q9NSB8 354 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
NIP7-203ENST00000562131 ALPK3Q96L96 1907 aa11.27□□□□□ -0.6
NIP7-203ENST00000562131 MYH4Q9Y623 1939 aa11.27□□□□□ -0.6
NIP7-203ENST00000562131 KBTBD13C9JR72 458 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 ATP2A1O14983 1001 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 ORC4O43929 436 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 FGRP09769 529 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 RARBP10826 455 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 MAGEA10P43363 369 aaPredicted RBP11.27□□□□□ -0.61
NIP7-203ENST00000562131 RABEP1Q15276 862 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 CCDC174Q6PII3 467 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 RASGRP2Q7LDG7 609 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 FAM160B2Q86V87 743 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 FERMT2Q96AC1 680 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 AGBL1Q96MI9 1066 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 XPNPEP3Q9NQH7 507 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 CTNNA3Q9UI47 895 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 CNPY2Q9Y2B0 182 aa11.27□□□□□ -0.61
NIP7-203ENST00000562131 ZNFX1Q9P2E3 1918 aaKnown RBP11.27□□□□□ -0.61
NIP7-203ENST00000562131 LAMA4Q16363 1823 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 DNAJC25-GNG10A0A024R161 153 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 PGK1P00558 417 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 ZNF865P0CJ78 1059 aaPredicted RBP11.26□□□□□ -0.61
NIP7-203ENST00000562131 FDX1P10109 184 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 OAZ1P54368 228 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 RTP1P59025 263 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 MDM2Q00987 491 aaPredicted RBP11.26□□□□□ -0.61
NIP7-203ENST00000562131 LRRC41Q15345 812 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
NIP7-203ENST00000562131 CCDC96Q2M329 555 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 MFSD6Q6ZSS7 791 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 CHST13Q8NET6 341 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
NIP7-203ENST00000562131 FBXO40Q9UH90 709 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 ZHX1Q9UKY1 873 aaPredicted RBP11.26□□□□□ -0.61
NIP7-203ENST00000562131 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 ZMYM6O95789 1325 aa11.26□□□□□ -0.61
NIP7-203ENST00000562131 LAMA3Q16787 3333 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 TRIOBPQ9H2D6 2365 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 A0A1W2PPC1 479 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 ZNF213O14771 459 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 SLC27A2O14975 620 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 PLA2G6O60733 806 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 SNAI1O95863 264 aaPredicted RBP11.25□□□□□ -0.61
NIP7-203ENST00000562131 ALAS1P13196 640 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 AKR1A1P14550 325 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 BMP8BP34820 402 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 NOVP48745 357 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 KRT32Q14532 448 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 NECTIN1Q15223 517 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 AKNAD1Q5T1N1 836 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 TTBK2Q6IQ55 1244 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 SLC39A5Q6ZMH5 540 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 LENG1Q96BZ8 264 aaPredicted RBP11.25□□□□□ -0.61
NIP7-203ENST00000562131 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 PRR12Q9ULL5 1215 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 ZNF536O15090 1300 aa11.25□□□□□ -0.61
NIP7-203ENST00000562131 FRMPD3Q5JV73 1810 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 SOX1O00570 391 aaPredicted RBP11.24□□□□□ -0.61
NIP7-203ENST00000562131 ST18O60284 1047 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 TOP1P11387 765 aaKnown RBP11.24□□□□□ -0.61
NIP7-203ENST00000562131 PSMA5P28066 241 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 SLC16A2P36021 539 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 CNTN2Q02246 1040 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 ACVR2BQ13705 512 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 BECN1Q14457 450 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 RNF180Q86T96 592 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 TBC1D10CQ8IV04 446 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 MSL3Q8N5Y2 521 aaKnown RBP11.24□□□□□ -0.61
NIP7-203ENST00000562131 DCAF4Q8WV16 495 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 LRCH3Q96II8 777 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 ZKSCAN3Q9BRR0 538 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 ACAD9Q9H845 621 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 GPCPD1Q9NPB8 672 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 TCP11L1Q9NUJ3 509 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.24□□□□□ -0.61
NIP7-203ENST00000562131 PRKAG2Q9UGJ0 569 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 FAM184BQ9ULE4 1060 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 SNX14Q9Y5W7 946 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 FRMPD2Q68DX3 1309 aaPredicted RBP11.24□□□□□ -0.61
NIP7-203ENST00000562131 SYNGAP1Q96PV0 1343 aa11.24□□□□□ -0.61
NIP7-203ENST00000562131 CYP21A2P08686 494 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
NIP7-203ENST00000562131 TRIM60Q495X7 471 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms