RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TBC1D8BQ0IIM8 1120 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 BLIDQ8IZY5 108 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 CSGALNACT2Q8N6G5 542 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 RASGRP4Q8TDF6 673 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 TUBGCP2Q9BSJ2 902 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
VPS9D1-202ENST00000561976 LRP5O75197 1615 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 ANKRD36CQ5JPF3 1778 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 NUP98P52948 1817 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 RCCD1A6NED2 376 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 CALML3P27482 149 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 CYP27A1Q02318 531 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 C2orf54Q08AI8 447 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 SELENOOQ9BVL4 669 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 KLK7P49862 253 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 IQCEQ6IPM2 695 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 GPKOWQ92917 476 aaPredicted RBP eCLIP15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 EFCC1Q9HA90 598 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 DUSP10Q9Y6W6 482 aa15.63■□□□□ 0.09
VPS9D1-202ENST00000561976 A0A0G2JS52 829 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 SRGNP10124 158 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 MYBL2P10244 700 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 PCP11498 1178 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 EVX2Q03828 476 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 KIF5AQ12840 1032 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 MEA1Q16626 185 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 TTC31Q49AM3 519 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 NUP58Q9BVL2 599 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 DUOX1Q9NRD9 1551 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC194A0A1B0GVG4 234 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 PDE2AO00408 941 aaPredicted RBP15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 MTIF2P46199 727 aaKnown RBP15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 KCNB1Q14721 858 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 NAALADL2Q58DX5 795 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 C4orf32Q8N8J7 132 aa15.62■□□□□ 0.09
VPS9D1-202ENST00000561976 TSPY2A6NKD2 308 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC170Q8IYT3 715 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 FAM76AQ8TAV0 307 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 SECISBP2LQ93073 1101 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 PLCH1Q4KWH8 1693 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 MYH13Q9UKX3 1938 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 FAM205AQ6ZU69 1335 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 ANO9A1A5B4 782 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 GOLGA6BA6NDN3 693 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 KIF5BP33176 963 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 CORO7P57737 925 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 ZBED6P86452 979 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 SPA17Q15506 151 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 DNAJC21Q5F1R6 531 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 TTI2Q6NXR4 508 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 ZNF662Q6ZS27 426 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 NOC3LQ8WTT2 800 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 DRC1Q96MC2 740 aa15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
VPS9D1-202ENST00000561976 GOLGA6CA6NDK9 693 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 WTIPA6NIX2 430 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 GOLGA6DP0CG33 693 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 GIMAP8Q8ND71 665 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC47Q96A33 483 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC42Q96M95 316 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 GOLGA6AQ9NYA3 693 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 KLRC4O43908 158 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 RHOBTB3O94955 611 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 FGRP09769 529 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 SLC4A8Q2Y0W8 1093 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 CAVIN4Q5BKX8 364 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 RETREG2Q8NC44 543 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 PPM1EQ8WY54 764 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 CNOT6LQ96LI5 555 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 NOC4LQ9BVI4 516 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 LRWD1Q9UFC0 647 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 PCDHA4Q9UN74 947 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 ZC3H4Q9UPT8 1303 aaKnown RBP15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 SLIT2O94813 1529 aa15.6■□□□□ 0.09
VPS9D1-202ENST00000561976 CCDC178Q5BJE1 867 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 DHTKD1Q96HY7 919 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 TMEM60Q9H2L4 133 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 MATR3P43243 847 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 NOP2P46087 812 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 VAV2P52735 878 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 PDE4DQ08499 809 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 SND1Q7KZF4 910 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 FAM114A1Q8IWE2 563 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 SMCR8Q8TEV9 937 aaPredicted RBP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 DUSP9Q99956 384 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 TSGA10Q9BZW7 698 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 TTYH3Q9C0H2 523 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 KAT14Q9H8E8 782 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 FAM184BQ9ULE4 1060 aa15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.59■□□□□ 0.09
VPS9D1-202ENST00000561976 AGPSO00116 658 aa15.58■□□□□ 0.09
VPS9D1-202ENST00000561976 ORC4O43929 436 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms