RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 PAPD7Q5XG87 772 aaKnown RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 EMBQ6PCB8 327 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 ZNF526Q8TF50 670 aaPredicted RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 DBNLQ9UJU6 430 aaKnown RBP20.74■□□□□ 0.91
RAB40C-206ENST00000561781 TAF1LQ8IZX4 1826 aa20.74■□□□□ 0.91
RAB40C-206ENST00000561781 EPHB4P54760 987 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 NFXL1Q6ZNB6 911 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 ANKRD23Q86SG2 305 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 OSBPL7Q9BZF2 842 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 C4BP0C0L5 1744 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 NUP188Q5SRE5 1749 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 FERP16591 822 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 MDH1P40925 334 aaKnown RBP20.73■□□□□ 0.91
RAB40C-206ENST00000561781 MAGEA8P43361 318 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 SCTRP47872 440 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 PAPOLAP51003 745 aaKnown RBP20.73■□□□□ 0.91
RAB40C-206ENST00000561781 LAMB3Q13751 1172 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 PTPAQ15257 358 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 DDX46Q7L014 1031 aaKnown RBP20.73■□□□□ 0.91
RAB40C-206ENST00000561781 MLKLQ8NB16 471 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 CYFIP2Q96F07 1278 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 YIPF3Q9GZM5 350 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.73■□□□□ 0.91
RAB40C-206ENST00000561781 PCDHGC5Q9Y5F6 944 aa20.73■□□□□ 0.91
RAB40C-206ENST00000561781 COL5A3P25940 1745 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 H7C1W4 665 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 ROR2Q01974 943 aaKnown RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 PDIA6Q15084 440 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 SLC9C2Q5TAH2 1124 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 MSL1Q68DK7 614 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 APTXQ7Z2E3 356 aaKnown RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 TBC1D31Q96DN5 1066 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 RRP36Q96EU6 259 aaKnown RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 NUP58Q9BVL2 599 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 HDAC6Q9UBN7 1215 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 RFX7Q2KHR2 1363 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 E7EVH7 732 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 STARD3NLO95772 234 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 EZH1Q92800 747 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 STAMBPL1Q96FJ0 436 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 SUDS3Q9H7L9 328 aaPredicted RBP20.72■□□□□ 0.91
RAB40C-206ENST00000561781 RREB1Q92766 1687 aa20.72■□□□□ 0.91
RAB40C-206ENST00000561781 ENC1O14682 589 aa20.71■□□□□ 0.91
RAB40C-206ENST00000561781 NR1D1P20393 614 aa20.71■□□□□ 0.91
RAB40C-206ENST00000561781 AIMP1Q12904 312 aaKnown RBP20.71■□□□□ 0.91
RAB40C-206ENST00000561781 RAB11FIP4Q86YS3 637 aa20.71■□□□□ 0.91
RAB40C-206ENST00000561781 CCDC87Q9NVE4 849 aa20.71■□□□□ 0.91
RAB40C-206ENST00000561781 RGL1Q9NZL6 768 aa20.71■□□□□ 0.91
RAB40C-206ENST00000561781 GRM8O00222 908 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 PBX1P40424 430 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 FXR1P51114 621 aaKnown RBP eCLIP20.7■□□□□ 0.91
RAB40C-206ENST00000561781 SEC24CP53992 1094 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 ERVK-24P63145 666 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 ELF3P78545 371 aaPredicted RBP20.7■□□□□ 0.91
RAB40C-206ENST00000561781 C1QTNF12Q5T7M4 302 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 CYP26C1Q6V0L0 522 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 SH2D3CQ8N5H7 860 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 ALS2CR12Q96Q35 445 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 BAIAP2L1Q9UHR4 511 aa20.7■□□□□ 0.91
RAB40C-206ENST00000561781 SH3TC1Q8TE82 1336 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 SOCS7O14512 581 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 GYPCP04921 128 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 GCLCP48506 637 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-206ENST00000561781 RIPK1Q13546 671 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 POSTNQ15063 836 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 ELOA2Q8IYF1 753 aaPredicted RBP20.7■□□□□ 0.9
RAB40C-206ENST00000561781 CAVIN3Q969G5 261 aa20.7■□□□□ 0.9
RAB40C-206ENST00000561781 OPLAHO14841 1288 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 ANP32DO95626 131 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 GHRP10912 638 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 MORC3Q14149 939 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 AKT1S1Q96B36 256 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 MAP3K14Q99558 947 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 DSCC1Q9BVC3 393 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 HAUS4Q9H6D7 363 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 PAPOLBQ9NRJ5 636 aaKnown RBP20.69■□□□□ 0.9
RAB40C-206ENST00000561781 ZMYM6O95789 1325 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 SRGAP2O75044 1071 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 PYGLP06737 847 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 HOXB7P09629 217 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 IMPDH2P12268 514 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 KCTD16Q68DU8 428 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 CCDC170Q8IYT3 715 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 C1orf131Q8NDD1 294 aaKnown RBP20.69■□□□□ 0.9
RAB40C-206ENST00000561781 CAPZA3Q96KX2 299 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 GUCA1BQ9UMX6 200 aa20.69■□□□□ 0.9
RAB40C-206ENST00000561781 LAMB4A4D0S4 1761 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 RGPD3A6NKT7 1758 aaPredicted RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 RGPD4Q7Z3J3 1758 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 CPLX1O14810 134 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 CDKL5O76039 1030 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 ATP1A1P05023 1023 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 R3HDM1Q15032 1099 aaKnown RBP20.68■□□□□ 0.9
RAB40C-206ENST00000561781 SPATA21Q7Z572 469 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 VPS37DQ86XT2 251 aa20.68■□□□□ 0.9
RAB40C-206ENST00000561781 JAKMIP2Q96AA8 810 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms