RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 CEP95Q96GE4 821 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 TMEM47Q9BQJ4 181 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.7□□□□□ -1.02
TPM1-231ENST00000561395 RNF26Q9BY78 433 aaPredicted RBP8.7□□□□□ -1.02
TPM1-231ENST00000561395 UNC93B1Q9H1C4 597 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 DNAJC18Q9H819 358 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 TMOD2Q9NZR1 351 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 CSADQ9Y600 493 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 RPTORQ8N122 1335 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 CNTNAP5Q8WYK1 1306 aa8.7□□□□□ -1.02
TPM1-231ENST00000561395 SPDYE5A6NIY4 337 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 FIBPO43427 364 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 DEXIO95424 95 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 SGPL1O95470 568 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 TOP1P11387 765 aaKnown RBP8.69□□□□□ -1.02
TPM1-231ENST00000561395 CETPP11597 493 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 AKR1B1P15121 316 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
TPM1-231ENST00000561395 HOXD10P28358 340 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 KIF5BP33176 963 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 KRT85P78386 507 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 GRM4Q14833 912 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 FAM173BQ6P4H8 233 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 C17orf99Q6UX52 265 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 C7orf61Q8IZ16 206 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.69□□□□□ -1.02
TPM1-231ENST00000561395 GPT2Q8TD30 523 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 AIFM3Q96NN9 605 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 GDPD2Q9HCC8 539 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 PI4KBQ9UBF8 816 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 ZNF70Q9UC06 446 aaPredicted RBP8.69□□□□□ -1.02
TPM1-231ENST00000561395 CPA4Q9UI42 421 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 STX8Q9UNK0 236 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 TTC28Q96AY4 2481 aa8.69□□□□□ -1.02
TPM1-231ENST00000561395 PHIPQ8WWQ0 1821 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 RIOK3O14730 519 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 PRPF3O43395 683 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 MBD3O95983 291 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 GUCY1A2P33402 732 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 MAP3K9P80192 1104 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 PRKCZQ05513 592 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 TRIM29Q14134 588 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 PPP4R3BQ5MIZ7 849 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 KRT40Q6A162 431 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 ATL3Q6DD88 541 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 TATDN1Q6P1N9 297 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 BRAPQ7Z569 592 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 ZSCAN29Q8IWY8 852 aaPredicted RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 TDHQ8IZJ6 230 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 CMTR1Q8N1G2 835 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 SRBD1Q8N5C6 995 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 SLAIN1Q8ND83 568 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 FAM151AQ8WW52 585 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 HOOK2Q96ED9 719 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 CCDC17Q96LX7 622 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 TEPSINQ96N21 525 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 TRIM34Q9BYJ4 488 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 GJB4Q9NTQ9 266 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 MTMR4Q9NYA4 1195 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 MAD2L2Q9UI95 211 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 ZMYND8Q9ULU4 1186 aaPredicted RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 SNCAIPQ9Y6H5 919 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 DDX49Q9Y6V7 483 aaKnown RBP8.68□□□□□ -1.02
TPM1-231ENST00000561395 ELP1O95163 1332 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 ADGRA2Q96PE1 1338 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 LTBP2Q14767 1821 aa8.68□□□□□ -1.02
TPM1-231ENST00000561395 PALM3A6NDB9 673 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 FAM196BA6NMK8 535 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 KIF28PB7ZC32 967 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 TCP10L2B9ZVM9 353 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 PLXNB2O15031 1838 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 GADD45BO75293 160 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 TTLL1O95922 423 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 GNAQP50148 359 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 UBE2HP62256 183 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 AKAP17AQ02040 695 aaKnown RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 SNAPC2Q13487 334 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 PKN1Q16512 942 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 FAM83AQ86UY5 434 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 FOXP4Q8IVH2 680 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 CCDC82Q8N4S0 544 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 LEO1Q8WVC0 666 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 PAWRQ96IZ0 340 aaKnown RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 ZNF396Q96N95 335 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 LZTS2Q9BRK4 669 aa8.67□□□□□ -1.02
TPM1-231ENST00000561395 SCAND2PQ9GZW5 306 aaPredicted RBP8.67□□□□□ -1.02
TPM1-231ENST00000561395 DOCK1Q14185 1865 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 MPHOSPH10O00566 681 aaKnown RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 IRF6O14896 467 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 TFRCP02786 760 aaKnown RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 MMP1P03956 469 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 INHAP05111 366 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 CHRM1P11229 460 aaPredicted RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 SYN1P17600 705 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 COL9A1P20849 921 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms