RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 IKQ13123 557 aaPredicted RBP18.84■□□□□ 0.61
LMX1B-204ENST00000561065 TTBK2Q6IQ55 1244 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 MAMDC4Q6UXC1 1216 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 CHST13Q8NET6 341 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 CHURC1Q8WUH1 139 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 DDX11Q96FC9 970 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 TCP11L1Q9NUJ3 509 aa18.84■□□□□ 0.61
LMX1B-204ENST00000561065 CTDP1Q9Y5B0 961 aaPredicted RBP18.84■□□□□ 0.61
LMX1B-204ENST00000561065 ASTN1O14525 1302 aa18.83■□□□□ 0.61
LMX1B-204ENST00000561065 SOX1O00570 391 aaPredicted RBP18.83■□□□□ 0.61
LMX1B-204ENST00000561065 ADCY6O43306 1168 aa18.83■□□□□ 0.61
LMX1B-204ENST00000561065 TOP1P11387 765 aaKnown RBP18.83■□□□□ 0.61
LMX1B-204ENST00000561065 CCDC96Q2M329 555 aa18.83■□□□□ 0.61
LMX1B-204ENST00000561065 CCDC174Q6PII3 467 aa18.83■□□□□ 0.61
LMX1B-204ENST00000561065 DCAF4Q8WV16 495 aa18.83■□□□□ 0.61
LMX1B-204ENST00000561065 A1CFQ9NQ94 594 aaKnown RBP18.83■□□□□ 0.61
LMX1B-204ENST00000561065 FRMPD2Q68DX3 1309 aaPredicted RBP18.82■□□□□ 0.6
LMX1B-204ENST00000561065 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 PGK1P00558 417 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 MYCNP04198 464 aaPredicted RBP18.82■□□□□ 0.6
LMX1B-204ENST00000561065 FDX1P10109 184 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 SLC16A2P36021 539 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 RTP1P59025 263 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 CNTN2Q02246 1040 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 MUM1L1Q5H9M0 696 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 TTC22Q5TAA0 569 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 ZNF467Q7Z7K2 595 aaPredicted RBP18.82■□□□□ 0.6
LMX1B-204ENST00000561065 ANKRD35Q8N283 1001 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 MSL3Q8N5Y2 521 aaKnown RBP18.82■□□□□ 0.6
LMX1B-204ENST00000561065 FAM133AQ8N9E0 248 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 ARRDC4Q8NCT1 418 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 ACAD9Q9H845 621 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 XPNPEP3Q9NQH7 507 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 FBXO40Q9UH90 709 aa18.82■□□□□ 0.6
LMX1B-204ENST00000561065 LAMA2P24043 3122 aaKnown RBP18.82■□□□□ 0.6
LMX1B-204ENST00000561065 A0A1W2PPC1 479 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 ADAMTS4O75173 837 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 RARBP10826 455 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 PDHBP11177 359 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 PCP11498 1178 aaKnown RBP18.81■□□□□ 0.6
LMX1B-204ENST00000561065 AKR1A1P14550 325 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 BMP8BP34820 402 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 SNX17Q15036 470 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 MFSD6Q6ZSS7 791 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 DSCC1Q9BVC3 393 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 KATNBL1Q9H079 304 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 RANBP17Q9H2T7 1088 aaKnown RBP18.81■□□□□ 0.6
LMX1B-204ENST00000561065 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.81■□□□□ 0.6
LMX1B-204ENST00000561065 ZHX1Q9UKY1 873 aaPredicted RBP18.81■□□□□ 0.6
LMX1B-204ENST00000561065 CNPY2Q9Y2B0 182 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 DDX49Q9Y6V7 483 aaKnown RBP18.81■□□□□ 0.6
LMX1B-204ENST00000561065 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
LMX1B-204ENST00000561065 ALAS1P13196 640 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 ADCYAP1R1P41586 468 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 IRX5P78411 483 aaPredicted RBP18.8■□□□□ 0.6
LMX1B-204ENST00000561065 BTNL9Q6UXG8 535 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 ARMCX2Q7L311 632 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 FERMT2Q96AC1 680 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 TRERF1Q96PN7 1200 aa18.8■□□□□ 0.6
LMX1B-204ENST00000561065 MYADML2A6NDP7 307 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 SOWAHBA6NEL2 793 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 ZNF213O14771 459 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 SNHG28P0DPA3 235 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 SYDE2Q5VT97 1194 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 SLC39A5Q6ZMH5 540 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 CCDC144CPQ8IYA2 1237 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 RNF41Q9H4P4 317 aaPredicted RBP18.79■□□□□ 0.6
LMX1B-204ENST00000561065 GPCPD1Q9NPB8 672 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 PHF24Q9UPV7 400 aa18.79■□□□□ 0.6
LMX1B-204ENST00000561065 B4E1Z4 1266 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 KDM4AO75164 1064 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 ICAM1P05362 532 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 NEFLP07196 543 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
LMX1B-204ENST00000561065 ZNF543Q08ER8 600 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 ACVR2BQ13705 512 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 TKFCQ3LXA3 575 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 TRIM60Q495X7 471 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 ESR2Q92731 530 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 LRCH3Q96II8 777 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 PURBQ96QR8 312 aaKnown RBP18.78■□□□□ 0.6
LMX1B-204ENST00000561065 CCPG1Q9ULG6 757 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 ATP11BQ9Y2G3 1177 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 MYH6P13533 1939 aa18.78■□□□□ 0.6
LMX1B-204ENST00000561065 POTEB2H3BUK9 544 aa18.77■□□□□ 0.6
LMX1B-204ENST00000561065 RUFY2Q8WXA3 655 aa18.77■□□□□ 0.6
LMX1B-204ENST00000561065 CYP39A1Q9NYL5 469 aa18.77■□□□□ 0.6
LMX1B-204ENST00000561065 A0A1W2PQ45 241 aaPredicted RBP18.76■□□□□ 0.59
LMX1B-204ENST00000561065 A0A1W2PQY0 241 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 NFIBO00712 420 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 CCSAPQ6IQ19 270 aaPredicted RBP18.76■□□□□ 0.59
LMX1B-204ENST00000561065 KLHDC9Q8NEP7 349 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 TTC14Q96N46 770 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 CPVLQ9H3G5 476 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 ABHD16BQ9H3Z7 469 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 PDLIM7Q9NR12 457 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 FAM184BQ9ULE4 1060 aa18.76■□□□□ 0.59
LMX1B-204ENST00000561065 RAD50Q92878 1312 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms