RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
RTF1-206ENST00000560447 C6orf50Q9HD87 102 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 DAGLAQ9Y4D2 1042 aa11.01□□□□□ -0.65
RTF1-206ENST00000560447 MYH4Q9Y623 1939 aa11□□□□□ -0.65
RTF1-206ENST00000560447 A0A087WWV3 80 aa11□□□□□ -0.65
RTF1-206ENST00000560447 KLRF2D3W0D1 207 aa11□□□□□ -0.65
RTF1-206ENST00000560447 C6orf229H3BNL8 230 aa11□□□□□ -0.65
RTF1-206ENST00000560447 SLC34A2O95436 690 aa11□□□□□ -0.65
RTF1-206ENST00000560447 ATP2B1P20020 1258 aa11□□□□□ -0.65
RTF1-206ENST00000560447 GABPAQ06546 454 aa11□□□□□ -0.65
RTF1-206ENST00000560447 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
RTF1-206ENST00000560447 PTPN14Q15678 1187 aa11□□□□□ -0.65
RTF1-206ENST00000560447 ZNF174Q15697 407 aa11□□□□□ -0.65
RTF1-206ENST00000560447 GRIK5Q16478 980 aa11□□□□□ -0.65
RTF1-206ENST00000560447 CFAP100Q494V2 611 aa11□□□□□ -0.65
RTF1-206ENST00000560447 ARSIQ5FYB1 569 aa11□□□□□ -0.65
RTF1-206ENST00000560447 DTHD1Q6ZMT9 781 aa11□□□□□ -0.65
RTF1-206ENST00000560447 C17orf53Q8N3J3 647 aaPredicted RBP11□□□□□ -0.65
RTF1-206ENST00000560447 RRP36Q96EU6 259 aaKnown RBP11□□□□□ -0.65
RTF1-206ENST00000560447 MASTLQ96GX5 879 aa11□□□□□ -0.65
RTF1-206ENST00000560447 ZC3H12CQ9C0D7 883 aaKnown RBP11□□□□□ -0.65
RTF1-206ENST00000560447 EHD4Q9H223 541 aa11□□□□□ -0.65
RTF1-206ENST00000560447 TMX1Q9H3N1 280 aa11□□□□□ -0.65
RTF1-206ENST00000560447 FANCLQ9NW38 375 aa11□□□□□ -0.65
RTF1-206ENST00000560447 NFE2L3Q9Y4A8 694 aa11□□□□□ -0.65
RTF1-206ENST00000560447 TNS1Q9HBL0 1735 aaKnown RBP11□□□□□ -0.65
RTF1-206ENST00000560447 PSME4Q14997 1843 aa11□□□□□ -0.65
RTF1-206ENST00000560447 IGKV6D-41A0A0C4DH26 115 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 VWA3AA6NCI4 1184 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 USP17L3A6NCW0 530 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 USP17L4A6NCW7 530 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SNHG28P0DPA3 235 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 CUL4BQ13620 913 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 KCNB1Q14721 858 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SPECC1Q5M775 1068 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SOGA3Q5TF21 947 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 CEP135Q66GS9 1140 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SPECC1LQ69YQ0 1117 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 WWC2Q6AWC2 1192 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 ARMCX5Q6P1M9 558 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 PDXDC2PQ6P474 469 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 USP49Q70CQ1 688 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 USP17L1Q7RTZ2 530 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 PDILTQ8N807 584 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 FBXW7Q969H0 707 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 EPSTI1Q96J88 318 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 CCDC17Q96LX7 622 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 GLT8D2Q9H1C3 349 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 RIOX1Q9H6W3 641 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SEC63Q9UGP8 760 aaKnown RBP10.99□□□□□ -0.65
RTF1-206ENST00000560447 PCDHA6Q9UN73 950 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 STX8Q9UNK0 236 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 PCDHA8Q9Y5H6 950 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 SYNRGQ9UMZ2 1314 aa10.99□□□□□ -0.65
RTF1-206ENST00000560447 COL2A1P02458 1487 aaPredicted RBP10.99□□□□□ -0.65
RTF1-206ENST00000560447 A0A087X0B3 334 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 A0A1B0GTH6 734 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 FOXN1O15353 648 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ARHGAP6O43182 974 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ZSCAN12O43309 604 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 SLC26A4O43511 780 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 CYTH3O43739 400 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 STX10O60499 249 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 TRIM37O94972 964 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 HLA-DOAP06340 250 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ATP1A3P13637 1013 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 CDK11BP21127 795 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 MMRN1Q13201 1228 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 HSP90AA2PQ14568 343 aaPredicted RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 NONOQ15233 471 aaKnown RBP eCLIP10.98□□□□□ -0.65
RTF1-206ENST00000560447 FILIP1LQ4L180 1135 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ZNF658Q5TYW1 1059 aaPredicted RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 CDKAL1Q5VV42 579 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ZNF772Q68DY9 489 aaPredicted RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 STYK1Q6J9G0 422 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 DPP8Q6V1X1 898 aaPredicted RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 STAG2Q8N3U4 1231 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ANKRD20A12PQ8NF67 263 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 KIF18AQ8NI77 898 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 CCDC51Q96ER9 411 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 NAP1L4Q99733 375 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 NAA15Q9BXJ9 866 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 SAP30BPQ9UHR5 308 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 RWDD2AQ9UIY3 292 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 BAZ2BQ9UIF8 2168 aaKnown RBP10.98□□□□□ -0.65
RTF1-206ENST00000560447 ITIH6Q6UXX5 1313 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 ARFGEF1Q9Y6D6 1849 aa10.98□□□□□ -0.65
RTF1-206ENST00000560447 MCM7P33993 719 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 NAPAP54920 295 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 GTF2IP78347 998 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 TRIM14Q14142 442 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 NR1I3Q14994 352 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
RTF1-206ENST00000560447 VARS2Q5ST30 1063 aaKnown RBP10.97□□□□□ -0.65
RTF1-206ENST00000560447 GPATCH4Q5T3I0 446 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms