RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LTBP2Q14767 1821 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 KBTBD13C9JR72 458 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 PTH1RQ03431 593 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 ZNF792Q3KQV3 632 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 CCDC178Q5BJE1 867 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 GPR153Q6NV75 609 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 CNNM2Q9H8M5 875 aa17.86■□□□□ 0.45
SNRPA1-210ENST00000560383 KDM4AO75164 1064 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 LRIT3Q3SXY7 679 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 SNRNP48Q6IEG0 339 aaKnown RBP17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 BTNL9Q6UXG8 535 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 TDHQ8IZJ6 230 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 CCDC136Q96JN2 1154 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 TINF2Q9BSI4 451 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 KRT23Q9C075 422 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 RIPK3Q9Y572 518 aa17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 U3KPZ7 1027 aaPredicted RBP17.85■□□□□ 0.45
SNRPA1-210ENST00000560383 B4E1Z4 1266 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 PGK2P07205 417 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 SNHG28P0DPA3 235 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 KCTD1Q719H9 257 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 ZSWIM5Q9P217 1185 aa17.84■□□□□ 0.45
SNRPA1-210ENST00000560383 SMCHD1A6NHR9 2005 aa17.83■□□□□ 0.45
SNRPA1-210ENST00000560383 ZNF536O15090 1300 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 SOX1O00570 391 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 CYP21A2P08686 494 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 PDHBP11177 359 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 SNX17Q15036 470 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 ZNF467Q7Z7K2 595 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 CPXCR1Q8N123 301 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 ZSCAN10Q96SZ4 725 aaPredicted RBP17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 RAVER2Q9HCJ3 691 aaKnown RBP17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 PRR12Q9ULL5 1215 aa17.83■□□□□ 0.44
SNRPA1-210ENST00000560383 RARBP10826 455 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 RTP1P59025 263 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 LRRC41Q15345 812 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 PRAMEF19Q5SWL8 479 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 C1orf53Q5VUE5 145 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 CHST13Q8NET6 341 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 ZKSCAN3Q9BRR0 538 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 ESYT1Q9BSJ8 1104 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 UBE2OQ9C0C9 1292 aaKnown RBP17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 CTDP1Q9Y5B0 961 aaPredicted RBP17.82■□□□□ 0.44
SNRPA1-210ENST00000560383 NEFLP07196 543 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 AKR1A1P14550 325 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 ATN1P54259 1190 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 ZNF543Q08ER8 600 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 IKQ13123 557 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 CCDC96Q2M329 555 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 ANO1Q5XXA6 986 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 MAMDC4Q6UXC1 1216 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 SLC39A5Q6ZMH5 540 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 ENAHQ8N8S7 591 aaPredicted RBP17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 LRCH3Q96II8 777 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 ISY1Q9ULR0 285 aaKnown RBP17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 CNPY2Q9Y2B0 182 aa17.81■□□□□ 0.44
SNRPA1-210ENST00000560383 TNKSO95271 1327 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 ZNF865P0CJ78 1059 aaPredicted RBP17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 TKFCQ3LXA3 575 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 RNF180Q86T96 592 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 CHMP4CQ96CF2 233 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 RANBP17Q9H2T7 1088 aaKnown RBP17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 PRKAG2Q9UGJ0 569 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 MTMR7Q9Y216 660 aa17.8■□□□□ 0.44
SNRPA1-210ENST00000560383 TRDNQ13061 729 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 SEC23AQ15436 765 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 GPATCH4Q5T3I0 446 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 SYDE2Q5VT97 1194 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 ERICH6BQ5W0A0 696 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 PNMA1Q8ND90 353 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 AGBL1Q96MI9 1066 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 LBHD1Q9BQE6 289 aaPredicted RBP17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 PHF24Q9UPV7 400 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 RBM8AQ9Y5S9 174 aaKnown RBP17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 TAF6LQ9Y6J9 622 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 MCM3APO60318 1980 aa17.79■□□□□ 0.44
SNRPA1-210ENST00000560383 E7EWF7 191 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 ICAM1P05362 532 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 TAL1P17542 331 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 SLC16A2P36021 539 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 ADCYAP1R1P41586 468 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 MDM2Q00987 491 aaPredicted RBP17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 CYB5R4Q7L1T6 521 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 UBAC1Q9BSL1 405 aa17.78■□□□□ 0.44
SNRPA1-210ENST00000560383 ACAD9Q9H845 621 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms